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Franco Izzo Profile
Franco Izzo

@FrancoIzzo85

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836
Following
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904

Assistant Professor at Icahn School of Medicine at Mount Sinai | Department of Oncological Sciences | Tisch Cancer Center || Opinions are my own

New York, USA
Joined November 2017
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@FrancoIzzo85
Franco Izzo
1 year
GoT-ChA! I am thrilled to announce that our paper "Mapping Genotypes to Chromatin Accessibility Profiles in Single Cells" is now out in @Nature !! 👩‍🔬👨‍🔬🧬If you want to link somatic mutations to epigenetic changes directly in patient samples: https://t.co/M9Y3wEvpuW 👇🧵
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@thalexandrov
Theodore Alexandrov
10 days
Our team is excited and honored to see our new method, HT SpaceM, for high-throughput single-cell metabolomics published in Cell! https://t.co/OEgNiEHgib 👇
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@LGMartelotto
Luciano Martelotto 🛠🧬💻🇦🇺
10 days
Amazing new paper from ⁦@nicholas_navin⁩’s lab! Coalescing single-cell genomes and transcriptomes to decode breast cancer progression: Cell
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cell.com
wellDR-seq allows single-cell whole-genome and transcriptome co-profiling at scale, enabling dissections of complex relationships between copy-number alterations and gene expression that inform our...
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@corsellos
Steven Corsello
13 days
Excited to share our discovery of potent TRIM21 molecular glues with anticancer activity, online today @CD_AACR: "Defining the antitumor mechanism of action of a clinical-stage compound as a selective degrader of the nuclear pore complex". 1/18
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@DengYanxiang
Yanxiang Deng
12 days
Spatial-DMT is now published in @Nature ! For the first time, we can simultaneously map DNA methylation and RNA transcription in tissue context. Great collab with @zhouwanding lab. Big congrats to Chin @Chin72155594 , Hongxiang @HongxiangFu and team!
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nature.com
Nature - DNA-methylation and gene-expression profiling of tissue sections at near single-cell resolution can be used to create detailed spatial maps showing how methylation and transcription...
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@tangming2005
Ming "Tommy" Tang
15 days
Nature methods: Co-profiling of in situ RNA-protein interactions and transcriptome in single cells and tissues https://t.co/P6GFcDcCfP
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@ShoTakeishi
Shoichiro Takeishi
18 days
Excited to share our latest work @Nature! We show that the total number of hematopoietic stem cells (HSCs) in the body is restricted, challenging the classical model that HSC numbers are determined locally by the niche and introducing a new paradigm. (1/9) https://t.co/kvFqNQ8Nxb
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nature.com
Nature - Haematopoietic stem cell numbers are restricted at both systemic and local levels.
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@UltimaGenomics
Ultima Genomics
1 month
A new bioRxiv preprint from the @landau_lab at New York Genome Center showcases the unmatched combination of sensitivity, efficiency, and cost-effectiveness made possible by #ppmSeq. Link to preprint: https://t.co/Ktk14kMfIm Link to PR: https://t.co/WBBdgweOwx
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@landau_lab
Dan Landau
1 month
🧨Exciting new pre-print! Introducing ppmSeq - cost effective, scalable dual-strand 🧬 sequencing. Scalability & ultra-low error in one! A game changer for somatic genome discovery science and cfDNA clinical apps. Check out thread for deets! @AlexandrePCheng @UltimaGenomics
@AlexandrePCheng
Alexandre Pellan Cheng
1 month
Highly accurate sequencing OR high throughput? We refuse to choose. Introducing paired plus-minus sequencing (ppmSeq), a method built to deliver both. Our latest paper with @UltimaGenomics 👀👀👀 See ⬇️ for a primer on the next frontier of genomics https://t.co/kl2KOaKziW
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@AlexandrePCheng
Alexandre Pellan Cheng
1 month
Highly accurate sequencing OR high throughput? We refuse to choose. Introducing paired plus-minus sequencing (ppmSeq), a method built to deliver both. Our latest paper with @UltimaGenomics 👀👀👀 See ⬇️ for a primer on the next frontier of genomics https://t.co/kl2KOaKziW
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@ScienceMagazine
Science Magazine
1 month
Researchers have developed a #DeepLearning system called BioEmu that rapidly generates diverse protein conformations, enabling fast, accurate insights into protein flexibility and function. Learn more this week in Science: https://t.co/Pe15hm9F52
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@ItaiYanai
Itai Yanai
1 month
Science doesn’t need to go according to plan; it just needs to lead to a discovery. If doesn’t have to be done alone or together with a buddy; there just needs to be a discovery. It doesn’t need to happen fast or slow; just as long as there’s a discovery, then everybody is happy.
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@BCD_AACR
Blood Cancer Discovery
1 month
Recently published: Multimodal and Data-Driven Assessment of Myeloid Neoplasms Refines Classification across Disease States https://t.co/zhHhCQrS7I
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@LabWaggoner
Waggoner Lab
1 month
Single-cell multitargets and mRNA sequencing enable the simultaneous profiling of transcriptome and up to six histone modifications in individual cells @RuggGunnLab @ScienceAdvances https://t.co/wpoUXLClye https://t.co/xkOa8IQHzJ preview by @haiqi_chen
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@MariosGeorgakis
Marios Georgakis
1 month
In GWAS studies, moving from a significant genomic locus to the driving genetic variants is challenging due to linkage disequilibrium. This review summarizes statistical fine-mapping methods that aim to detect potentially causal variants among sets of candidate variants.
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@MariosGeorgakis
Marios Georgakis
2 months
Enriching polygenic risk scores with single-cell ATAC-seq about chromatin accessibility in disease-relevant cell types shows potential to 👉improve predictive performance 👉better understand cells driving genetic predisposition to disease 👉uncover specific molecular drivers
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@vincentzliu
Vincent Liu
2 months
For innate immune cells, the lack of diverse receptor rearrangements has prevented the study of clonal evolution of the innate immune system in human tissues and tumors. With @satpathology and @caleblareau, I’m delighted to share my PhD work that tackles this challenge:
@biorxiv_genomic
bioRxiv Genomics
2 months
Clonal lineage tracing of innate immune cells in human cancer https://t.co/uw2udDLVPp #biorxiv_genomic
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@iannisaifantis1
Iannis Aifantis
2 months
Time to mark our calendars moving for our 3rd "Probing Human Disease using Single-Cell Technologies" @Fusion_Conf taking place March 1-4, 2026 in beautiful Playa Mujeres, Mexico!! Our first 15 speakers are already on board and Early Bird and Talk submissions on Sept 3rd! Dont
@Fusion_Conf
Fusion Conferences
3 months
Amy is looking forward to reuniting with familar faces, and welcoming new ones to the upcoming Single-Cell Technologies conference next year! A reminder that this meeting has sold out BOTH times, so do not delay getting registered and joining @iannisaifantis1 @satijalab and
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