UCSC Cell Browser
@cellbrowser
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Interactive Single Cell Data Explorer and Data Repository Learn more: https://t.co/BE8qg1pVuJ
Santa Cruz, CA
Joined May 2022
With the government shutdown impacting GEO submissions, we're happy to help researchers share their single-cell data in the meantime. You can easily submit datasets here: https://t.co/FT8Pol3JKE We’re not a substitute for GEO, but an alternative tool for hosting and visualizing
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With the government shutdown impacting GEO submissions, we're happy to help researchers share their single-cell data in the meantime. You can easily submit datasets here: https://t.co/FT8Pol3JKE We’re not a substitute for GEO, but an alternative tool for hosting and visualizing
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🧠We've just add the Human Neural Organoid Cell Atlas to the UCSC Cell Browser! Come explore it here: https://t.co/1BbInVqnvR Big congratulations to ZhiSong He et al. and the whole team on this massive atlas!!!!👏 #singlecell #brainorganoids #developingbrain #neuraldisease
So honor and excited as a part of the great team with @josch_f @SophieMJ_Jansen leaded by @TreutleinLab @GrayCampLab. In our @Nature study, we generated a #singlecell atlas of early #brainorganoid development, and studied regulations of cell fate decision
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Congrats to Dr. Alison Cole @Alison20132006 for her recent publication in Frontiers in Zoology! Come explore the updated Nematostella V2 Atlas. 👇 https://t.co/y4zkbF7Svs
Check out our updated single cell atlas of Nematostella, by @AlisonCole: https://t.co/sfoQPJldbW It was completely remapped on the new chromosome scale genome and gene annotation (PMID: 38092765), but also contains new data and analyses. Great work, Alison!
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@prnano9 @AllenInstitute @DanielaJDiBella @LodatoS_Lab @ArlottaLab This is just one example of how our meta-atlas can generate testable hypotheses. Check out/download our data from the UCSC Cell Browser ( https://t.co/eHmYWDqmmF). (13/16)
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🐁 Another amazing mouse dataset to check out! Come learn about rare newborn cells in mouse brains: https://t.co/0RMfwTZSF8 Many thanks to our submitter Ziyu Lu! @ziyu__lu
#singlenucleus #snRNAseq #progenitorcells #mouse #oligodendrogenesis #neurogenesis #TrackerSci
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New rat dataset! 🐀 Come explore the rat liver atlas on the UCSC Cell Browser. https://t.co/zPXPZqvm2E Special thanks to our submitter Delaram Pouyabahar! @DelaramPB
#rat #singlecell #liver #atlas #transcriptomics
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Big congratulations to Yonatan and team at UCSF on releasing their new paper in Science! 👏 You can explore this prenatal and postnatal human cortical development dataset on the UCSC Cell Browser: https://t.co/y6CQ8yhoyY
#SingleCell #humanbrain #corticaldevelopment
Check out our new paper, just released: Single-cell analysis of prenatal and postnatal human cortical development | Science
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Our single cell atlas from trigeminal ganglion cells was released on @cellbrowser ! Check out 🖥️
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🐁New mouse dataset! Come view a single cell atlas of mice trigeminal ganglion cells: https://t.co/4mfAHtMzdY Many thanks to our submitter Cristal Villalba @anunicorn1um! #SingleCellResearch #TrigeminalGanglion #CraniofacialPain #MiceResearch
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New dataset added! 🧠Come explore this new Alzheimer's Disease and aging brain atlas across 400 human brains from the ROSMAP project. Many thanks to our submitter Carles Boix and PIs @manoliskellis @DrLiHueiTsai
https://t.co/jilxkum0Ce
#agingbrain #alzheimersdisease
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We love seeing this number grow year after year 🌎🌍🌏 #Diversity #community #HCA2023GM #singlecell #humancellatlas
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We’re really looking forward to #HCA2023GM starting tomorrow! To join us virtually, be sure to register at https://t.co/70hpQNBBAQ.
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To spatially dive into the datasets, check out the webbrowsers at: https://t.co/gdTlAT4MNr or https://t.co/ZLfMEXpFkC
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We propose the ectodermal muscle may be a novel anthozoan muscle cell type. The single cell data is housed on the UCSC @cellbrowser! Thanks to @UlrichTechnau and all co-authors for making this possible. 4/4
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Newly published dataset! Come view snRNA-seq data of brain samples from DAP12-deficient Nasu-Hakola diseased individuals here: https://t.co/4FimMknZEq Submitted by @YingyueZhou at @TheColonnaLab
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New dataset added! Come view glia diversity in the human hippocampus. https://t.co/mSfye4CTl8 Submitted by @YijingSu2022 @zhoujoeyyi @Upenn_SongMing
#snRNAseq #singlenucleus #transcriptomics
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Thrilled to share our work on spatial cell type mapping of MS lesions spearheaded by @Cels121 and @PauBadiaM | paired single-cell & spatial transcriptomics | Thanks @saezlab, Simon Hametner, @DenisSchapiro @cellbrowser
biorxiv.org
Multiple sclerosis (MS) is a prototypic chronic-inflammatory disease of the central nervous system. After initial lesion formation during active demyelination, inflammation is gradually compartment...
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Sawasdee 🙏! The UCSC Team is here at the #HCA2022Asia meeting in Bangkok! Come check out our posters tomorrow Nov 4th at posters #25 and #26. #SingleCell #visualization @humancellatlas
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