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Kozo Tomita Lab: RNA Biology Profile
Kozo Tomita Lab: RNA Biology

@RnaLaboratory

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Department of Computational Biology and Medical Sciences, Graduate School of Frontier Sciences, The University of Tokyo Kashiwa, Chiba 277-0882, Japan

Joined December 2021
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@RnaLaboratory
Kozo Tomita Lab: RNA Biology
20 days
We are pleased to share our paper "Structures and mechanisms of U6 snRNA m6A modification by METTL16” Nature Communications https://t.co/FTYxDJm3f4
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@NatureSMB
NatureStructMolBiol
5 days
New online! tRNA as an assembly chaperone for a macromolecular transcription-processing complex https://t.co/15YPdu5qx7
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@MartinPacesa
Martin Pacesa
13 days
Exciting to see our protein binder design pipeline BindCraft published in its final form in @Nature ! This has been an amazing collaborative effort with Lennart, @csche11h, @sokrypton, @befcorreia and many other amazing lab members and collaborators. https://t.co/PTMoqQqwcU
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@UTokyo_News
東京大学 | UTokyo
16 days
[プレスリリース] 正確なmRNAスプライシングを制御するU6 snRNAのm6A修飾の分子機構を解明――スプライシング異常が原因の疾患理解に貢献―――新領域創成科学研究科 https://t.co/EaUsC1ilT4
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u-tokyo.ac.jp
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@ikalvet
Indrek Kalvet
19 days
RFdiffusion2 is now live! https://t.co/H5bsYd0YuA You can now design proteins, and in particular enzymes from just partially defined amino acid side chains, and without defining their sequence position or order! Great job @r_krishna3 @woodyahern @dougtischer and everyone else!
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@JuliaBauman2
Julia Bauman
22 days
The most radically recoded genome yet! Syn57 is E Coli with only 57 codons, freeing space to encode up to 4 non-canonical amino acids. That, combined with its virus resistance, will make it an incredible tool for biomanufacturing. From the Chin Lab in @ScienceMagazine
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@BaharogluZeynep
Zeynep Baharoglu
26 days
🦠 Launching a bimonthly digest on RNA modifications and related topics in bacteria!🤩 First issue: Summer 2025. Shared here + by email, future ones will be quicker reads! 😅 #rnamodifications #bacteria #ribosome Subscribe and share if you are interested!
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@peteratmsr
Peter Lee
26 days
Featured on the cover of @ScienceMagazine, BioEmu @MSFTResearch, a deep learning system that rapidly generates diverse protein conformations for accurate insights into protein function. Illustration: N. Burgess/Science; Data: S. Lewis et al., https://t.co/V0fRBX4EXc.
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@RnaLaboratory
Kozo Tomita Lab: RNA Biology
1 month
Seminars by Dr. Dominique Fourmy and Dr. Satoko Yoshizawa (CNRS, ENS Paris-Saclay, Université Paris-Saclay) on new antibiotic susceptibility tests and innovative antimicrobial strategies. Really enjoyed them — fascinating work!
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@GlattSebastian
Sebastian Glatt
1 month
We are excited to share our latest research on Q-modification in precursor-tRNAs, which just got published in @NatureComms. This was an very exciting and fruitful collaboration with @francescatuorto in Heidelberg. https://t.co/73krcQRqwV
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nature.com
Nature Communications - tRNA modifications are essential for function, yet their timing relative to processing is unclear. Here, the authors show that queuosine and derivative modifications occur...
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@ShorterLab
ShorterLab
2 months
A resource of RNA-binding protein motifs across eukaryotes reveals evolutionary dynamics and gene-regulatory function:
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nature.com
Nature Biotechnology - RNA-binding motifs in eukaryotic proteins are presented in a comprehensive resource.
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@RnaLaboratory
Kozo Tomita Lab: RNA Biology
2 months
Had a great scientific time at RNA Tokyo @ IQB UTokyo with Prof. Phillip Zamore and RNA PIs from the Tokyo area. Big thanks to Prof. Yuki Tomari for organizing! Great discussions—and a fun evening at Hantei after the seminar.
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@Patrick18287926
Patrick Bryant
2 months
Our study where we develop EvoBind2: Design of linear and cyclic peptide binders from protein sequence information is now published! https://t.co/WPjPaWmTuT
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@MSFTResearch
Microsoft Research
2 months
Today in the journal Science: BioEmu from Microsoft Research AI for Science. This generative deep learning method emulates protein equilibrium ensembles – key for understanding protein function at scale. https://t.co/WwKjj5B0eb
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@BaharogluZeynep
Zeynep Baharoglu
2 months
The eukaryotic tRNA chaperone La impacts tRNA modification levels (queuosine and others). Interesting because in procaryotes, tRNA modif enzymes themselves are thought to be chaperones. In both cases, there seems to be a link between modif and chaperones.
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academic.oup.com
Abstract. The RNA-binding protein La is found in most eukaryotes, and despite being essential in many organisms, its function is not completely clear. Tryp
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@RnaLaboratory
Kozo Tomita Lab: RNA Biology
2 months
We attended the 26th Annual meeting of RNA society of Japan in Sendai. Wondetful meeting as always and thank you organizers! A phD student and a postdoc from my lab presented their research.
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@RnaLaboratory
Kozo Tomita Lab: RNA Biology
3 months
Thank you Prof. Rujuan Liu for hosting and inviting me to the seminar at SLST, ShanghaiTech. It was a fruitful and enjoyable visit — great to meet and discuss with faculties and students!
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@RnaLaboratory
Kozo Tomita Lab: RNA Biology
3 months
Arrived at Shanghai for seminar at ShanghaiTech tomorrow. Feel that Shanghai is really an enetgetic city!
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