
Patrick Kidger
@PatrickKidger
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I do SciML + open source! 🧪ML+proteins@ https://t.co/04dWAWzCyl 📚Neural ODEs: https://t.co/ODOKWjub5k 🤖JAX ecosystem: https://t.co/8kXzaG9XVf 🧑💻Prev. Google, Oxford
Mostly Zürich? I travel a lot.
Joined July 2020
⚡️ My PhD thesis is on arXiv! ⚡️ To quote my examiners it is "the textbook of neural differential equations" - across ordinary/controlled/stochastic diffeqs. w/ unpublished material: - generalised adjoint methods - symbolic regression - + more! https://t.co/Pm5l6FhEED v🧵 1/n
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🚀 New talk! "Automated ML-guided lead optimization: surpassing human-level performance at protein engineering" ▶️ https://t.co/GhDHBynqL0 ✨🧪 This was a talk I gave at the recent AIxBIO conference in Cambridge UK. A 10-minute pitch for what we do at Cradle!
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Today we’re releasing real-world experimental data for over 1000 novel AI-designed proteins on our new platform @proteinbase!
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Sora 2 is now built into HeyGen. We were granted early access by the OpenAI team to explore how Sora 2 could live inside a platform designed for storytelling. That trust gave us the chance to bring something new to our users: not just another model integration, but a way to
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A reminder that there is now *1 week* left until the MLSB deadline on October 1st! Send in your 🧪bio+🤖ML papers, for either 🇺🇸San Diego, 🇩🇰Copenhagen, or ✨both✨!
🚨To accommodate the addition of EuroMLSB, we have extended the submission deadline to October 1, 2025 11:59pm AoE. Find information on paper guidelines at https://t.co/wv9C4wezso. Submissions will be made through CMT.
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Taking a first step towards hibernation pods :) Just announced a $58M Series A led by @foundersfund to back the core roadmap reversibly cryopreserve human organs -> help transplant patients + build sustainable business -> accelerate R&D for whole body cryo
We’ve raised $100M+ to date, we are developing reversible cryopreservation for patients in need of donor organs, and we are hiring 🫀🎉🚀
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Today we're dropping the "beta" tag from Adaptyv, launching our new website and announcing our $8M seed round. When we started Adaptyv a few years ago, our core belief was: AI models for biology are only as good as the experimental data they're trained on and the hypotheses
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🚨 We’re hiring! The OPIG group is looking for multiple postdocs to join OpenBind, an open science initiative generating foundational structural biology data to power the next era of AI/ML for drug discovery. https://t.co/nCRTFuqadT
https://t.co/ShjU5gOul8
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💥 We are *also* organizing Machine Learning for Structural Biology @ EurIPS, Copenhagen!! Topics include anything in the ML+bio intersection. Submit your ML+bio short papers! Authors can even present in both locations if they have people in both locations 🚀
You asked and we listened...@workshopmlsb is excited to be expanding to Copenhagen, DK at @EurIPSConf 🎉 Two workshops (San Diego & Copenhagen) will run concurrently to support broader attendance. You can indicate your ranked location preference in the submission portal💫
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🚀 So `tinyio` hit the front page of Hacker News. Now we're at 487 GitHub stars :D I've also just done a ✨v0.2 release✨. Now batteries-included with common operations (locks, etc.) and with a major performance improvement. GitHub:
github.com
Ever used asyncio and wished you hadn't? A tiny (~300 lines) event loop for Python. - patrick-kidger/tinyio
✨Announcing: tinyio! A tiny barebones event loop library for Python. Born out of my frustration with asyncio... GitHub: https://t.co/TMbUvIUP00 It's nothing too fancy, just a little library that does one thing well. 🔥
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✨v0.1 release of typst_pyimage!✨ Do you: - write scientific papers in Typst (boo hiss LaTeX)? - have many matplotlib figures? Would you like the code for those images inlined directly into your Typst file, and autogenerated when you compile it?🔥 https://t.co/SSGEeyE3Hv
github.com
Typst extension, adding support for generating figures using inline Python code - patrick-kidger/typst_pyimage
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✨Announcing: tinyio! A tiny barebones event loop library for Python. Born out of my frustration with asyncio... GitHub: https://t.co/TMbUvIUP00 It's nothing too fancy, just a little library that does one thing well. 🔥
github.com
Ever used asyncio and wished you hadn't? A tiny (~300 lines) event loop for Python. - patrick-kidger/tinyio
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✨ We are hiring to build out our automated wet lab! 🤖🦾🧪 https://t.co/fI74vmmeDf
jobs.ashbyhq.com
THIS IS CRADLE Proteins are the molecular machines of life, used for many therapeutic, diagnostic, chemical, agricultural and food applications. Designing and optimizing proteins takes a lot of...
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@sara_mostafavi (@genentech ) & I (@Stanford) r excited to announce co-advised postdoc positions for candidates with deep expertise in ML for bio (especially sequence to function models, causal perturbational models & single cell models). See details below. Pls RT 1/
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Whoops, wrong link 😅 Thanks to those who pointed this out! https://t.co/OculSNGhUN
jobs.ashbyhq.com
This is an exceptional opportunity to join a very early stage company reimagining protein design through a computational- and AI-first approach. If you’re an ML Researcher with experience in the...
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✨Cradle is hiring protein+ML researchers!✨ We operate ML for lab-in-the-loop lead optimization across all industries (pharma, synbio, ...), modalities (antibodies, enzymes, ...), properties (binding, activity, ...) We're a scaleup and already relied upon by 4 of the top 20
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🚨 We’re hiring @sangerinstitute! Join us as a Postdoc or ML Scientist to build generative & foundation models for biology. 🧬 Spatial + single-cell omics 🧠 Diffusion, transformers, multimodal data 💊 Drug discovery via Open Targets Apply: Postdocs in computational biology
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Fantastic news for genome engineers: Bridge recombinases work in human cells!!🧬 And they can make really big insertions, deletions, and inversions with impressive efficiency. From @arcinstitute @pdhsu @ntperry13 & team
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Really pleased to share what I have been working on for 2 months: 🇬🇧 UK SovAI are today announcing our £8m seed investment into OpenBind - A consortium that will actually make AI for drug discovery great by generating 500k experiment protein-ligand complexes!! Explainer 🧵 (1/n)
Excited to see this announcement from the Government’s SovereignAI unit: funding for the world’s largest dataset of protein interactions, led by a truly world-class group of researchers As @demishassabis says, “This is a brilliant initiative for UK science”
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This library brought to you originally by my need to debug re-raised exceptions in some of the libraries I'm using. Then in my usual fashion I just kept adding features, and now we have a whole library 😄 If like me your debugging experience has been a lot of `pdb`, then this
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🚀 Announcing: ✨patdb✨! A fast pretty TUI/REPL debugger for Python. (Not a database!😄) Think stdlib pdb, now with... - Syntax highlighting - re-raised+grouped exceptions - robust to async/threading/multiprocessing - ... ! > pip install patdb GitHub: https://t.co/4wilZ9xZy1
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