Ira Iosub
@IraIosub
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Postdoc @TheCrick. RNA-RNA and protein-RNA interactions. Genomics. Gene expression. Computational Biology. @Crick_DC organiser
Joined October 2012
@AshlingGiblin @adrianisaacslab @DorotheaBoeken @KlenermanLab @benn_jojo @w_mcewan @DrSorayaM @Rob_McGeachan @ScotsFriction @Dani_edineuro @ClaireDurrant1 Reproducibility Prize aims to promote open science by developing sustainable and reproducible practices as part of research output 🥇 @IraIosub (@ule_lab) for riboseq-flow
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Had an amazing time at the @nextflowio summit & @nf_core hackathon last week! Incredible community energy and growth. 👉Check out the poster for riboseq-flow, the ribo-seq pipeline @OscarWilkins16 & I developed: https://t.co/Vy8THOTKb2
#NextflowSummit
summit.nextflow.io
Join us at the Nextflow SUMMIT 2024 for the latest developments and innovations from the Nextflow world.
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That’s a wrap!🎉 Huge thanks to our incredible organisers @elias_copin @mingran_cao @ISalgarella – you made the #CrickDataChallenge a huge success! Big thanks to our teams and sponsor @SeqeraLabs. Fantastic work from everyone🙌 - can't wait to see where these projects go! #hack
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#CrickDataChallenge is in full swing! 👩💻👨🔬 Join us at 13:00 @TheCrick to see @KristinaUlicna's lecture!
Sooo looking forward to this! 🤩 Come join me @TheCrick Institute tomorrow 13:00-14:00 🕐 @Crick_DC to hear about our ongoing #AI projects 💻 in the space of bioimage analysis 🖼️, (pheno)-map building 🗺️ & vision transformers 🤖 we're developing @Valence_AI🧬 & @RecursionPharma💊
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Crick Data Challenge kicks off tomorrow!🎉Our keynote speaker @KristinaUlicna from @valence_ai will share cutting-edge insights on AI-driven single-cell representations and insights from her career! Don’t miss it, open to everyone @TheCrick. 🙌 @SeqeraLabs for making it possible!
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The 7th Crick Data Challenge is almost here! Huge thanks to @SeqeraLabs for sponsoring our 3-day #hackathon, and to all our participants. @TheCrick researchers will join data experts from academia and industry to break new ground in biomedicine through data science! 📅 Oct 16-18
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🚀Less than a week until the 6th Crick Data Challenge, our 3-day #hackathon uniting @TheCrick scientists and data experts to tackle big scientific problems 🥼💻! Thrilled to have @embl @emblebi as partners.🤝Huge thanks to our sponsor @SeqeraLabs ! 🙏 📅 Oct 11-13 📍 @TheCrick
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We identified a mechanism by which the homeostasis of class of proteins with similar low complexity domains (LCDs) is collectively regulated – ‘interstasis’. Interstasis operates at the level of the RNA that encodes those LCDs by exploiting the structure of the genetic code.
Mutual homeostasis of charged proteins https://t.co/Ecj9RsZatd
#biorxiv_molbio
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Crick Data Challenge. 👀 11-13th October at the Francis Crick Institute. Friends at @TheCrick will deliver this Hackathon-style event fostering collaborations between wet lab biologists & data scientists. Our own @HanNamshik will give the keynote talk. https://t.co/7SSKsV2847
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Great to see this published! I started working on this project during the #CrickDataChallenge 3 day hackathon at The Francis Crick Institute. Can't quite believe that our scrappy proof of concept made in those 3 days eventually morphed into this! @Crick_DC @TheCrick
Fast chromatographic gradients and glycoproteomics? In our latest study we show that the scanning dimension in scanning SWATH can be used to assign precursor masses to oxonium ions for glycopeptide quantification @whit3matt @RalserLab
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Last week we held our fifth Crick Data Challenge, a three day #hackathon style event that brings together Crick scientists 🥼 and data experts 💻 to tackle big scientific problems. Here are some tips for organising a scientific hackathon of your own: https://t.co/hlKW70ETbz
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We're very happy to announce the release of @nf_core /cutandrun, a best practice analysis @nextflowio pipeline for #cutandrun and #cutandtag. First developed by the Henikoff lab at @fredhutch, a team at @TheCrick turned it into a reproducible, containerised Nextflow pipeline.
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In a first-in-human trial, researchers find that a treatment for glioblastoma based on interfering RNAs & gold nanoparticles can penetrate the brain. This bodes well for potential treatment of these tumors but further clinical testing is needed. https://t.co/unjCBpUird
@ScienceTM
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"Science is a process, but it’s also a community. Strive to be a constructive critic and a scientist who invites helpful feedback on your own work." Advice on how to give and receive criticism from the latest #LTYS column from @ScienceCareers:
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Proud to see our work published in its final shape in @eLife! Thank you @GrannemanSander for your relentless support and perseverance in driving this project towards a success.
elifesciences.org
High-throughput RNA-RNA interaction analysis uncovers many novel sRNA-target interactions at various growth stages in Escherichia coli.
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RIC-seq for global in situ profiling of RNA–RNA spatial interactions
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Promising clinical results on antisense oligonucleotides for #HuntingtonsDisease are giving hope for other diseases. Learn more about the research: https://t.co/F1unqNodRT
#SciMagPerspective #Medicine
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In the latest issue: prediction of #antibiotic activity in #molecules that are structurally different from known #antibiotics #AntibioticResistance #machinelearning #drugdiscovery
https://t.co/fv81LvGf5I
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