Marc Elosua-Bayés
@elosua_bayes
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Staff Scientist - @BostonChildrens & @harvardmed | PhD @CNAG-@CRGenomica & @MSKCancerCenter | Outdoors lover 🛶 | Bioinformatics 🧬💻🧑💻
Joined January 2018
THRILLED to share our latest work at the @hoheyn lab: "SPOTlight: Seeded NMF regression to Deconvolute Spatial Transcriptomics Spots with Single-Cell Transcriptomes". . THREAD (1/n) . #singlecellcnag #spatialtranscriptomics #visium
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RT @hoheyn: "It reads like a song." The best compliment I’ve ever received for a paper ⭐️. We closely monitored a one-year-old child with….
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RT @DrSamuelBHume: This is amazing: the first large, randomized trial to show that exercise improves survival after cancer . The benefit f….
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RT @tangming2005: 1/. "Just do a quick analysis.". If you're a bioinformatician, you've heard this before. But here's the truth 👇 https….
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RT @hoheyn: 🚨 Inflammation Atlas – Version 2 is here! 🚨.MAJOR update of our INFLAMMATION ATLAS, including >6.5 million single cells from 1,….
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RT @HeidariElyas: 1/9.New preprint out! 🍳.Our team at @EMBL, @DKFZ, and @MSKCancerCenter built #segger—a fast, accurate cell segmentation t….
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RT @paulanietog: I'm thrilled to finally share the publication of this collaborative paper in @NatureComms ! Excited to contribute to the i….
nature.com
Nature Communications - ‘T cell engagers promote antitumor immunity, but how macrophage modulates this activity in tumor is still unclear. Here the authors show, using biopsies from patients...
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RT @BroadMPG: 📣The recording of "Introduction to scRNAseq workflow" by @elosua_bayes .is now available: This talk i….
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RT @hoheyn: STAMP is OUT!. Sequencing-free #singlecell RNA and Protein profiling. Game-changing approach for scalable and cost-efficient a….
biorxiv.org
We introduce Single-Cell Transcriptomics Analysis and Multimodal Profiling (STAMP), a scalable profiling approach of individual cells. Leveraging transcriptomics and proteomics imaging platforms,...
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RT @alumniUPF: 🏅 Vuit #alumniUPF i doctorands del Programa de Doctorat en Biomedicina rebran el Premi Extraordinari de l'Escola de Doctorat….
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RT @cnag_eu: 🙌So proud of @rmassonix and @elosua_bayes, who deffended their thesis at #CNAG. Their thesis supervisors:.- Ivo Gut (Director….
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RT @MorghanLucas: I’m honoured to receive the UPF PhD in Biomedicine Special Award along with my friends and @CRGenomica PhD mates @xavier_….
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RT @saezlab: Congrats @JulioSaezRod 🥳 As a group we are looking forward to collaborating with our new @emblebi colleagues. It was nice to c….
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RT @MHemingNeuro: @tangming2005 @theHumanBorch FindMarkers is now much (~30x in my use case) faster than previously (which is critical in l….
github.com
@bnprks Thank you so much for this awesome package. Using BPCells is worlds faster and worlds more memory efficient, which allows analyzing huge datasets. The integration by @Gesmira and others int...
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RT @BiotechPedro: In case you are interested in visualizing genes co-expression (or any other two continuous variables) on whatever space,….
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As I'm starting to dive into #plink for genetic analysis I was wondering which tutorials are the best to get started, any recommendations/best practices?.
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RT @roramirezf94: Writing this piece has been quite fulfilling (and scary). I spent half of last year putting in order some of my thoughts….
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RT @hoheyn: THE most complete T cell repertoire of a single breast cancer patient!. 1 Primary tumor, 15 biopsies on treatment, 18 blood sam….
nature.com
Nature Communications - Immune response during breast cancer progression remains to be explored. Here, the characterisation of sequential and parallel multiregion samples of an index patient and a...
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RT @hoheyn: ENJOY READING:. A Human Tonsil Atlas @ImmunityCP . Proud to present our @humancellatlas work generating an "Atlas of Cells in t….
cell.com
Massoni-Badosa et al. present a comprehensive human tonsil cell atlas, identifying 121 cell types and states through multimodal single-cell profiling. This atlas elucidates cell differentiation...
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RT @themis_brown: Fantastic day of discussions and science @BostonChildrens @Harvard. Thank you to @TimSpringerLab for the invitation and….
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