Amazing resource: 2 million T cells from 70 studies, 1017 biological samples, 583 individuals, and 46 disease conditions https://t.co/5mPPIN9WDf

If you are working in the space of HLA/MHC and viral infection or vaccination - please see the special issue from Viruses. If you are interested, please reach out!! https://t.co/3FTtd6dhIa

Congratulations Dr. Hogg and team @SciImmunology: #dendritic cells can matter in #PancreaticCancer, patients. See it at https://t.co/H1qM3Sx9Vy Big thanks to Swim Across America @SAA_Inc St. Louis and Pedal the Cause @pedalthecause for supporting this research and trial.

TCR2HLA: calibrated inference of HLA genotypes from TCR repertoires enables identification of immunologically relevant metaclonotypes https://t.co/fXNkiiApgl #biorxiv_immuno

Researching at the intersection of HLA and viral infections - check out the special issue from Viruses. https://t.co/3FTtd6cJSC

scRepertoire now supports exporting clones directly into the immunarch workflow @immunomind. Immune cells crosstalk, why not R packages? Vignette: https://t.co/9EvDtNntP8

dandelionR: Single-cell immune repertoire trajectory analysis in R is out! https://t.co/CwZt0hZ45k Checkout our package at https://t.co/DUHdzq0V7P and on Bioconductor 3.21 onwards! Thanks to everyone involved! @theHumanBorch

Offering a wide variety (and growing) methods for analyzing B and T cell immune repertoires - even simultaneously.

With the ability to process 1 million single-cell clones in < 20 seconds. scRepertoire has been rebuilt from the ground up with C++ integration.

1st paper out as the senior author, fittingly it is the revamped scRepertoire: building a more comprehensive and efficient single-cell immune profiling ecosystem!! Large thanks to my co-authors @KelvinTuong and others Paper: https://t.co/uXI6vEam4W Repo: https://t.co/WUNyJfDayz

Can a cancer exploit its environment and still resist treatment? Yes, through co-existing malignant subclones! Let me walk you through our latest study on how divergent evolution drives aggressiveness, and drug resistance of T cell cancer. 1/🧵 https://t.co/KJXwb02uJQ

Delighted to share our recently published work in @NatImmunol. We show here that normalized microbial exposures in mice enhance memory T cell surveillance of the brain and modify seizure outcomes.

Nitin Karandikar, MD, PhD, has been named the enterprise chief strategy officer for University of Iowa Health Care, expanding his executive leadership responsibilities while he continues as professor and chair of the Department of Pathology. https://t.co/jn7rFIxip7...

1/15 Want to decode pathway activity in single cells? Understand ssGSEA, GSVA, AUCell, and UCell—tools that score gene sets per cell. Here's how they work 🧵

Wait tell they see your new paper!! @theallinpod thanks for the shout out!!

Incredible, neither data nor code nor weights are being made publicly available. @Nature publishes advertisements as Articles now I guess.

Happy #MatchDay to our new @washu_pathology residents! We’re all excited and eager to work with you!

Attention T cell biologists! New required reading from the one and only @golnaz_v on how the epigenome directs T cell fate and function. https://t.co/CxEdT9qRY5

scRepertoire now has a function to remove TCR/BCR VDJ genes from the variable features used for dimensional reduction. Friends don't let friends bias their clusters with indirect measures of clonal expansion. https://t.co/R15RhqxH2f

Feature selection methods affect the performance of scRNA-seq data integration and querying❤️