Amy YH Hung
@AmyHung_yh
Followers
80
Following
233
Media
0
Statuses
50
Scientist in translational bioinformatics 🧬
Boston, MA
Joined January 2021
Congrats to @AmyHung_yh! She is soaring now as a principal scientist in the translational bioinf group @bmsnews. Special thanks to @TheSpenceLab for the excellent collaboration and the @Cornell SCP! @cornellvet @VillanJon @CornellRsrch
https://t.co/x0N4YI7p6r
#intestine #miRNA
bmcgenomics.biomedcentral.com
Background MicroRNAs (miRNAs) are important post-transcriptional gene regulators controlling cellular lineage specification and differentiation during embryonic development, including the gastroint...
0
2
11
✨✨ New Package ✨✨ Happy to announce that I am soft launching another R color palette package, {MoMAColors} today! Currently has 35 palettes based around artwork at @MuseumModernArt. Download Instruction and Palettes here: https://t.co/xWbfV1vsGm
#r4ds #dataviz #rstats
27
481
3K
A great resource: Genome-wide enhancer-gene regulatory maps link causal variants to target genes underlying human cancer risk https://t.co/QSbOPhXp80
0
27
67
Dr. Praveen Sethupathy ’03, professor of physiological genomics, has been named as the next chair of the Department of Biomedical Sciences at #CornellVet. He will assume the role in October 2024. Congratulations, @PraveenSethup! 👏
vet.cornell.edu
Dr. Praveen Sethupathy ’03, professor of physiological genomics, has been named as the next chair of the Department of Biomedical Sciences. He will assume the role on October 1, 2024.
7
5
64
After a long and unsuccessful search for a statistical inference and regression textbook at the right level for our PhD students, I finally decided to write up my lecture notes as a book. The book is publicly available if you are interested: https://t.co/XDB34FjaMS
35
705
4K
1/ False belief: I need to learn fancy machine learning stuff or algorithms for computational biology. Reality: most of us will only need to learn the data skills to answer biological questions. Find the roadmap below 👇 🧵
5
72
291
We've been working on Seurat v5 for two years and are excited to share it with you soon! In a webinar w/@10xGenomics and @ScienceMagazine on 3/29, I'll introduce new methods to analyze spatial/multimodal datasets that scale to tens of millions of cells:
3
152
606
🙏🙏Please RT? 🙏🙏 Multiple positions available in the Verzi Lab Join a great team of colleagues Post Doc | Senior Research Scientist | Lab Manager | Organoid Core Facility Director https://t.co/97HcLukN84 A range of salaries available, consistent with experience.
verzilab.org
0
20
23
Praveen, @PraveenSethup you have been an amazing mentor! 💯 I cannot thank you enough for your support and guidance over the past 5 years. Goodbyes are always bittersweet, but those good memories I had in your lab will last forever🌟
After 5 years, my amazing post-doc, Amy Hung @AmyHung_yh, is moving on to Boston for the next step in her life and career. Twitterverse, will you permit me a moment to celebrate a wonderful human being and scientist? @Cornell @cornellvet @CornellRsrch @CornellCVG 1/n
0
0
9
New version of our comparison of transformations for single-cell data is on https://t.co/WvBINrR7lB 🥳🎉 We completely revised the paper. Across three benchmarks, we show that, despite its theoretical shortcomings, no transformation consistently outperforms log(y/s + 1) 🤯
2
100
356
Kudos to my amazing post-doc, Amy Hung, on leading this outstanding work, now out as a pre-print: https://t.co/1MvFrCAl2N
@AmyHung_yh @CornellRsrch @cornellvet
0
8
28
This `anno_GO_keywords()` function should be very useful. It automatically applies GSEA (ORA) on each gene list and adds word cloud annotation from GO keywords to the gene expression heatmap. See example at https://t.co/EH3Gg4HHEM
13
91
465
Vertical sleeve drives intestinal stem cell fate toward enteroendocrine cells through bile acid signaling: https://t.co/ZreMuEh1Z4. Great work led by @DarleenSandoval and team, so pleased to collaborate. Congrats to Ki-Suk and all co-authors! @JCI_insight @AmyHung_yh @K_hyphen_L
0
2
7
Our BayesPrism paper, led by the incredibly talented @tinyichu, is finally published! BayesPrism accurately infers both cell types *and* gene expression in each cell type from bulk RNA-seq data using scRNA-seq. https://t.co/0Kv6g7OfGt
nature.com
Nature Cancer - Danko and colleagues develop BayesPrism, a bulk RNA sequencing deconvolution tool to infer cell type composition and cell-specific expression levels across clinical cancer datasets.
5
59
204
For everyone who needs to hear this today: @OpenAcademics @firstphdchat @PhDVoice #phdchat #PhdLife #phdchat #AcademicChatter #AcademicTwitter (Also, this is my first illustration 😊)
7
172
1K
On his last day as @NIHDirector, we want to #ThankYouDrCollins for his service. As the longest serving appointed Director, he has steered the country’s largest medical research agency with a calm hand, a scientific mind, & a deep commitment to the well-being of all Americans.
51
149
1K
Like this cover depicting RNA pol II and chromatin as roller coaster!
1
0
1
✨✨New Package✨✨ Happy to announce that I am soft launching my R color palette package {MetBrewer} today! Currently has over 30 palettes inspired by works at the @metmuseum and expanding! Download Instruction and Palettes here: https://t.co/Imk2UzfJiz
#r4ds #dataviz #rstats
72
907
5K
GATA4 promotes simple columnar and represses stratified squamous epithelial tissue morphogenesis @MBattleLab @MCW_CBNA
https://t.co/kL90cEH98M
0
6
9