Ye Zheng
@yezhengSTAT
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Assistant Professor@MD Anderson Bioinfo and Comp Bio (joint Systems Biology); NIH/NHGRI K99; Statistics; Epigenomics and 3D Genomics; Cancer Studies
Houston, TX
Joined April 2016
RT @Wu_Honggui: Our scMicro-C paper is out in @NatureGenet! Huge thanks to the reviewers for their valuable insights, to @XieSunney for unw….
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RT @IamLinghua: 📢 Now live at @Nature.Our team discovered that PPP2R1A mutations are linked to improved response to immunotherapy in ovar….
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ADTnorm for single-cell protein integration is officially published in NC! Seeking feedbacks and comments on our tool usage!!
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RT @DengYanxiang: Our spatial FFPE-ATAC-seq is now published in @NatureComms! With extensive optimizations, it performs well across diverse….
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RT @naturemethods: Proseg is a segmentation tool for single-cell spatial transcriptomics data that uses unsupervised probabilistic modeling….
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Hiring computational and statistical postdoc: Please recommend!!.
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Cannot believe our wet lab( first experiment was directly successful! FFPE epigenomic studies officially started! Excited to collaborate with more experts in cancer fields! Previous work in meningioma now on Science Hire postdoc!
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RT @lh3lh3: longcallD is a new variant caller for genomic long reads. It jointly calls phased small and structural variants. Single binary,….
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RT @zhou_jingtian: 1/10 Excited to share our latest - the first whole-body map of both DNA methylation and 3D genome at single-cell resolut….
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RT @yuefeng_1: Excited to share another collaborative study with Dr. Joe Costello - Intratumor heterogeneity of 3D genome organization in p….
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RT @NadiyaKhyzha: My paper on profiling transcriptome composition and dynamics within nuclear compartments using SLAM-RT&Tag is officially….
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RT @biorxivpreprint: 🎉bioRxiv & medRxiv are now managed by openRxiv, a new independent nonprofit. This transition allows for more flexibili….
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RT @science_seattle: 🧬 Researchers at @fredhutch have uncovered an overlooked mechanism driving aggressive breast and brain tumors. Learn….
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RT @CellGenomics: Capturing cell-type-specific activities of cis-regulatory elements from peak-based single-cell ATAC-seq .
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RT @naturemethods: Cell2fate improves RNA velocity analysis of single-cell and spatial transcriptomics data by module decomposition of real….
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RT @yuefeng_1: Excited to share our latest work, showing GATA6 is a critical regulator in colorectal cancer and 3D genome organization. Led….
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It is an amazing collaboration experience with Steven Henikoff and the Henikoff lab crew. 2024 summer was full of scientific excitement and sparking ideas!.
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We are open to collaborations on cancer studies leveraging FFPE samples. Also, we are actively hiring Research Interns, Graduate Research Assistants, and Postdocs. Check out the potential project topics 💡
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I am running a dynamic and hybrid group in Bioinformatics and Computational Biology department at MD Anderson. Our research spans epigenomics, 3D genomics, proteomics, and their applications in cancer studies, immunotherapies, and other diseases. 🖥️🔬🌟/.
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Huge thanks to @JulieENagy for crafting such an excellent press release! 🙌 Check it out here: 🔗
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