bioRxiv
@biorxivpreprint
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Daily summaries of preprints posted in each bioRxiv Subject Area. Find ways to get social media alerts to individual papers at https://t.co/wrlEW1phDV
Joined October 2013
AutoMorFi: Automated Whole-image Morphometry in Fiji/ImageJ for Diverse Image Analysis Needs #bioRxiv.
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I have a sibling! Welcome @medrxivpreprint, now live at with 16 papers (and more on the way…)
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bioRxiv has launched a pilot to provide AI-generated summaries for all preprints thanks to @Science_Cast. We hope this will increase a preprint’s reach. Feedback welcome below. Full announcement:
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mRNA-1273 vaccine induces neutralizing antibodies against spike mutants from global SARS-CoV-2 variants #bioRxiv.
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AlphaPulldown - a Python package for protein-protein interaction screens using AlphaFold-Multimer #bioRxiv.
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Drag-and-drop genome insertion without DNA cleavage with CRISPR-directed integrases #bioRxiv.
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Large-scale genomic study reveals robust activation of the immune system following advanced Inner Engineering meditation retreat. #bioRxiv.
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RNAlater and flash freezing storage methods nonrandomly influence observed gene expression in RNAseq experiments #bioRxiv.
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Horizontal and vertical transmission of transgenerational memories via the Cer1 transposon #bioRxiv.
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Melatonin drugs inhibit SARS-CoV-2 entry into the brain and virus-induced damage of cerebral small vessels #bioRxiv.
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Effects of vapor exposure to Δ9-tetrahydrocannabinol (THC) in the Maine Lobster (Homarus americanus) #bioRxiv.
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🎉bioRxiv & medRxiv are now managed by openRxiv, a new independent nonprofit. This transition allows for more flexibility and innovation. Our community-centered mission remains being a free service to authors ensuring rapid sharing of scientific information before peer review. 🧵.
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TSWIFT, a novel method for iterative staining of embedded and mounted human brain sections. #bioRxiv.
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Rock the Chalk: A five-year comparative analysis of a large microbiology lecture course reveals improved outcomes of chalk-talk compared to PowerPoint #bioRxiv.
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The GRE Over the Entire Range of Scores Lacks Predictive Ability for PhD Outcomes in the Biomedical Sciences #bioRxiv.
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RT-qPCR DETECTION OF SARS-CoV-2 RNA FROM PATIENT NASOPHARYNGEAL SWAB USING QIAGEN RNEASY KITS OR DIRECTLY VIA OMISSION OF AN RNA EXTRACTION STEP #bioRxiv.
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SARS-CoV-2 Spike protein variant D614G increases infectivity and retains sensitivity to antibodies that target the receptor binding domain #bioRxiv.
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pysradb: A Python package to query next-generation sequencing metadata and data from NCBI Sequence Read Archive #bioRxiv.
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Illumina But With Nanopore: Sequencing Illumina libraries at high accuracy on the ONT MinION using R2C2 #bioRxiv.
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bioRxiv is almost 10 years old and medRxiv just turned 4! 🎉 Tell us how we’ve done so far & how to keep improving by answering the bioRxiv & medRxiv survey!.Deadline: December 10th, 11:59 PM EST.Length: 15-20 mins.🔗Thank you!.#biorxiv #medrxiv #preprints
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Microbe-seq: high-throughput, single-microbe genomics with strain resolution, applied to a human gut microbiome #bioRxiv.
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Autophagy controls mucus secretion from intestinal goblet cells by alleviating ER stress #bioRxiv.
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LazyAF, a pipeline for accessible medium-scale in silico prediction of protein-protein interactions #bioRxiv.
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A SARS-CoV-2-Human Protein-Protein Interaction Map Reveals Drug Targets and Potential Drug-Repurposing #bioRxiv.
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The Tabula Sapiens: a single cell transcriptomic atlas of multiple organs from individual human donors #bioRxiv.
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PlasmidMaker: a Versatile, Automated, and High Throughput End-to-End Platform for Plasmid Construction #bioRxiv.
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Auto-qPCR: A Python based web app for automated and reproducible analysis of qPCR data #bioRxiv.
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Transcriptomic characterization of 20 organs and tissues from mouse at single cell resolution creates a Tabula Muris #bioRxiv.
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Preliminary report of preclinical efficacy and safety analysis of gamma-irradiated inactivated SARS-CoV-2 vaccine candidates, SK-01 version 1 and OZG-3861 version 1 #bioRxiv.
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Supervising the PhD: identifying common mismatches in expectations between candidate and supervisor to improve research training outcomes #bioRxiv.
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Interpreting Neural Networks for Biological Sequences by Learning Stochastic Masks #bioRxiv.
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Flowers respond to pollinator sound within minutes by increasing nectar sugar concentration. #bioRxiv.
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NERD-seq: A novel approach of Nanopore direct RNA sequencing that expands representation of non-coding RNAs #bioRxiv.
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SARS-CoV-2 vaccination induces immunological memory able to cross-recognize variants from Alpha to Omicron #bioRxiv.
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mCherry contains a fluorescent protein isoform that interferes with its reporter function #bioRxiv.
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When less is more - Endogenous tagging with TurboID increases the sensitivity of proximity labelling-based experiments #bioRxiv.
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AlphaFold2 and RoseTTAFold Predict Posttranslational modifications. Chromophore Formation in GFP-like Proteins. #bioRxiv.
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Structural Basis for the Inhibition of the RNA-Dependent RNA Polymerase from SARS-CoV-2 by Remdesivir #bioRxiv.
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Robust de novo design of protein binding proteins from target structural information alone #bioRxiv.
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An orally bioavailable broad-spectrum antiviral inhibits SARS-CoV-2 and multiple endemic, epidemic and bat coronavirus #bioRxiv.
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OpenCell: proteome-scale endogenous tagging enables the cartography of human cellular organization #bioRxiv.
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Bioconda: A sustainable and comprehensive software distribution for the life sciences #bioRxiv.
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