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Srinjan Lab @srinjan.bsky.social Profile
Srinjan Lab @srinjan.bsky.social

@srinjan_basu

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Lecturer @ImperialLifeSci @imperialcollege |Unravelling DNA mysteries in stem cells by staring at little dots|#salsa dancer|he/him |.

Cambridge, England
Joined June 2015
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@srinjan_basu
Srinjan Lab @srinjan.bsky.social
5 months
New #preprint from the Basu & Stewart labs! We discover a non-catalytic role for H3K4me3 methyltransferase MLL2 in modulating 3D chromatin organisation and mobility as pluripotent cells are primed for differentiation.
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@srinjan_basu
Srinjan Lab @srinjan.bsky.social
19 days
Location: Flowers building G47A. 15:30: Annabelle Wurmser: “Capturing chromatin dynamics during neuromesodermal progenitor specification” . 16:00: Daniela Dietrich (University of Bristol) – “Hydrotrotropism – how roots search for water". 17:00 Social Happy Hour (SEC, 7th floor).
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@srinjan_basu
Srinjan Lab @srinjan.bsky.social
19 days
This Friday 27th June, we have another exciting set of talks at our monthly Cell and Developmental Biology Networking Event @ImperialLifeSci with Daniela Dietrich @dnl_dietrich joining us from Bristol and our very own Annabelle Wurmser from my lab. Please do join us!.
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@srinjan_basu
Srinjan Lab @srinjan.bsky.social
1 month
RT @dandavis101: Launching my new book SELF DEFENCE at the @Ri_Science TONIGHT - come along!
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@srinjan_basu
Srinjan Lab @srinjan.bsky.social
1 month
RT @dandavis101: My new book about the sceince of immune health is published today! SELF DEFENCE. Is mental health really connected to infl….
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@srinjan_basu
Srinjan Lab @srinjan.bsky.social
1 month
RT @dandavis101: My interview with @whippletom is in @thetimes today. What a last line!
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@srinjan_basu
Srinjan Lab @srinjan.bsky.social
2 months
Congrats @TzelepisLab.
@TzelepisLab
Kostas Tzelepis
2 months
Check out the latest @NatureBiotech Research Briefing regarding our recent work on therapeutic targeting of cell surface RBPs in cancer 🔥🔥.
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@srinjan_basu
Srinjan Lab @srinjan.bsky.social
2 months
RT @TzelepisLab: Check out the latest @NatureBiotech Research Briefing regarding our recent work on therapeutic targeting of cell surface R….
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@srinjan_basu
Srinjan Lab @srinjan.bsky.social
4 months
RT @Hallou_Lab: 🚨 Paper Alert 🚨 .Absolutely delighted to share our last paper on "spatial mechano-transcriptomics" in @naturemethods👇!!.htt….
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@srinjan_basu
Srinjan Lab @srinjan.bsky.social
4 months
RT @dandavis101: Launching my new book at The Hay Festival - please come along! @hayfestival
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@srinjan_basu
Srinjan Lab @srinjan.bsky.social
4 months
RT @kazu_maeshima: I am seeking an Assistant Professor in my lab. If you are interested, please contact me! 📩.ゲノムダイナミクス研究室で助教を公募中です。ご興味のある方….
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@srinjan_basu
Srinjan Lab @srinjan.bsky.social
4 months
RT @PradeepMadapura: Happy Holi! The festival of UMAP
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@srinjan_basu
Srinjan Lab @srinjan.bsky.social
4 months
RT @efapostolou29: Beautiful work by the Stadtfeld and @TommyVierbuchen labs on the role of genetic variation on imprinting and dna methyl….
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@srinjan_basu
Srinjan Lab @srinjan.bsky.social
5 months
RT @OliverStegle: Job alert. Postdoc in our group. Great opportunity to push the boundaries of AI approaches for human genetics. We will sc….
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@srinjan_basu
Srinjan Lab @srinjan.bsky.social
5 months
RT @PradeepMadapura: Cell and molecular biology PhD? I am recruiting a postdoc to work on exciting epigenetics and chromatin projects in Lo….
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@srinjan_basu
Srinjan Lab @srinjan.bsky.social
5 months
Look forward to hearing feedback from the field!.
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@srinjan_basu
Srinjan Lab @srinjan.bsky.social
5 months
Thanks also to our collaborator labs for all their help on this: Samarajiwa, Huntly, @KlenermanLab @David_Holcman @BertieGottgens @PradeepMadapura @imohorianu.
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@srinjan_basu
Srinjan Lab @srinjan.bsky.social
5 months
Huge congrats to first authors @MaikeSteindel & Oliver Davis! This has also been quite the team effort from the whole lab: Liviu, Shuyue, @gokceagsu @DeepAdhyaPhD @jorgmorf @AnnabelWurmser @StanStrawbridge @SCICambridge @ImperialLifeSci.
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@srinjan_basu
Srinjan Lab @srinjan.bsky.social
5 months
Using single-molecule imaging, we find that MLL2 acts like a tether, restricting chromatin mobility genome-wide and at the Mll2-dependent gene Sox2. This suggests a model where MLL2 tethering increases enhancer-promoter mixing at key neuroectoderm genes to drive differentiation.
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@srinjan_basu
Srinjan Lab @srinjan.bsky.social
5 months
Micro-C reveals that MLL2’s effect on chromatin architecture is more substantial, stabilising enhancer-promoter loops associated with bivalent genes in primed pluripotent cells. Interestingly, MLL2’s catalytic activity is not required for loop formation or differentiation.
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@srinjan_basu
Srinjan Lab @srinjan.bsky.social
5 months
However, single-cell transcriptomics and quantitative immunofluorescence of the priming transition reveal that MLL2 has only a subtle change on transcription, increasing the expression of a few important neuroectodermal transcription factors such as SOX2.
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