spatial.ist_papers
@spatial_papers
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Last news on spatial biology! Part of @spatialistbio
Joined February 2024
Hello World! 🌍 Exciting news: We've just launched @spatial_papers, your go-to source for intriguing spatial biology articles. 🧬As part of @spatialistbio, we aim to empower scientists by spotlighting the wonders of #SpatialBiology. Join us on this scientific journey!.
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RT @Aiims1742: Impressive talk by Sammy Ferri-Borgogno on multi modality spatial profiling at PreCancer Atlas symposium @MDAndersonNews .Ex….
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RT @PhyloBrain: NEW AVIAN BRAIN ALERT!.Check our research on the development of the pallium in birds🐣 and reptiles🦎. Comparative neurogenes….
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RT @deniswirtz: CODA day!.The CODA team at @JohnsHopkins maps pancreatic precursor lesions in 3D and at single-cell level. First 3D spatial….
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RT @mssanjavickovic: How about combining single-cell and spatial transcriptomics to study tissue and cellular spatiotemporal dynamics in co….
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RT @EvNewell1: Using in situ spatial transcriptomics? Try Proseg, @danielcjones’s new cell segmentation method based on probabilistic and C….
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RT @bhuva_dd: “Library size confounds biology in spatial transcriptomics data” finally out in Genome biology!. TL;DR.- LS normalisation is….
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RT @TonyZador: We used BARseq in situ sequencing to identify genes in ***1.2 million neurons*** throughout the mouse brain. We found that c….
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RT @ascanet: Xu et al. combined Stereo-seq with single-cell transcriptomic profiling to generate a high-definition spatiotemporal atlas of….
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RT @embl: SpatialData is a tool developed by EMBL scientists in cooperation with multiple research institutions to unify & integrate data f….
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RT @alissacg: I’m very happy to share our paper in @CellCellPress on the spatial organization of GBM! Check out ou….
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RT @johnhickey22: 🔥Absolutely thrilled to share a pair of papers out in @CellPress of work done with @garrypnolan. 🔬 T cell mediated restr….
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RT @fabian_theis: Excited to share Nicheformer! Led by @Alejandro__TL & @AnnaCSchaar, Nicheformer is a foundation model for single-cell &….
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RT @juhyunk_: Spatial transcriptomics reveals discrete tumour microenvironments and autocrine loops within ovarian cancer subclones https:/….
nature.com
Nature Communications - Intratumoural heterogeneity in high-grade serous ovarian carcinoma (HGSOC) remains to be explored. Here, the authors perform spatial transcriptomics and reveal a high degree...
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RT @shyam_lab: 1. BANKSY is out! Our spatial clustering algo applies to any spatial RNA/protein/. assay, scales t….
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RT @mo_lotfollahi: 1/n: 🔬We introduce NicheCompass (NC) a graph learning model to build spatial atlases across millions of cells, quantitat….
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RT @HaoYin20: #CellCharter. A powerful single-cell #SpatialTranscriptomics analysis framework.Graph-based #DeepLearning . Spatial cluster:….
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RT @S_Poovathingal: 1/11 Check out our preprint introducing Nova-ST, a high resolution, spatial barcoding workflow developed by repurposing….
biorxiv.org
Spatial transcriptomics workflows using barcoded capture arrays are commonly used for resolving gene expression in tissues. However, existing techniques are either limited by capture array density or...
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RT @RichGangLi: Our newest manuscript is out today! Very happy to share this story about the microenvironment during in vivo cardiac renewa….
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RT @RongFan8: 🤩🤩🤩 Spatial Omics fans, I am super excited to share our latest manuscript!!! 🤩🤩🤩 .#spatialomics #spatialbiology #singlecell….
biorxiv.org
Spatial transcriptomics has emerged as a powerful tool for dissecting spatial cellular heterogeneity but as of today is largely limited to gene expression analysis. Yet, the life of RNA molecules is...
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