Rami
@Rami96614090
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Student @TU_Muenchen @menze_group & @HelmholtzMunich @erturklab
Bavaria, Germany
Joined April 2019
Very cool challenge at #MICCAI 2025! Join us and dive deep into some complex structure segmentation! π§
TopBrain ππ§ challenge happening at MICCAI 2025! First public challenge on 40+ brain vessel segmentation on MRA and CTA! We look forward to your registration at https://t.co/9BT1ZfeUZA Submission is until mid-late Sep πͺ
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Amazed to share our new study published in @CellCellPress revealing how the liver contributes to weight loss in cancer via disruption of a circadian regulator and secretion of catabolic factors. Big thanks to @FiskerSchmidt, S. Herzig, @BerrielDiaz π§΅π https://t.co/2fvK9ExTMO
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Have a look at our data and join us at #MICCAI2025!
π Excited to announce the #MICCAI2025 SELMA3D 2025 challenge on SSL for 3D light-sheet microscopy segmentation! This year, we are introducing an even larger, more diverse dataset of 3D light-sheet microscopy images π Learn more and join us:
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We have developed DELIVR, a user-friendly deep-learning pipeline for automatically detecting and analyzing cells from whole-brain images to map neuronal activity via cFOS. DELIVR uses virtual reality to substantially accelerate the generation of training data and is accessible to
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Interested in generating graphs that preserve the semantic (& structural) constraints for biological graphs? Check out our paper "Semantically Consistent Graph Generation" β accepted in MICCAI 25 !
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The validation phase of this yearβs BraTS Inpainting Challenge is on! #BraTS2025 #Lighthouse #MICCAI Looking forward to seeing your creative and innovative ideas! https://t.co/dXVoaCWKO2
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Nanocarrier imaging at single-cell resolution across entire mouse bodies with deep learning https://t.co/4RhnmhJ0PE
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LNP/mRNA therapeutics and AAV-based approaches require cell-level precision to achieve success without significant toxicity to other cells. To enable this, we now introduce SCP-Nanoπ€ in @NatureBiotech: an AI-based technology for precision nanotechnology. https://t.co/1YniGZr4O4
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SCP-Nano: Advancing Precision Medicine with Nanocarrier Visualization How can life-saving therapies reach their target cells without harmful side effects? π https://t.co/8b2ONpOGNE π‘Researchers at #HelmholtzMunich, @LMU_Muenchen, and @TU_Muenchen have developed SCP-Nano
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Our new study shows that SARS-CoV-2 spike protein accumulates & persists in the body for years after infection, especially in the skull-meninges-brain axis, potentially driving long COVID. mRNA vaccines help but cannot stop itπ¬π§ π¦ π§΅π@cellhostmicrobe
https://t.co/IEGx7HIrXf
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Very excited to share our newes preprint! A holistic view of the impact of a disease on the whole body on the cellular level!
Imagine seeing a disease's impact on every cell in the body. Now, you can! We introduce MouseMapper, an AI tool to reveal system-wide disease perturbations. MouseMapper showed obesity-induced changes in facial nerves & body-wide inflammation ππΌπ§΅ https://t.co/2sPQra70xx
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Very excited to share our newest preprint! Our new AI tool MouseMapper provides a pipeline to quantify the changes in peripheral nerves and immune cells in HFD mice.
Imagine seeing a disease's impact on every cell in the body. Now, you can! We introduce MouseMapper, an AI tool to reveal system-wide disease perturbations. MouseMapper showed obesity-induced changes in facial nerves & body-wide inflammation ππΌπ§΅ https://t.co/2sPQra70xx
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Every cell matters! Check out our new study on obesity where we used deep learning-based quantitative analysis on whole bodies of obese mice as well as we applied spatial proteomics to extract underlying molecular mechanisms of structurally perturbed nerves!
Imagine seeing a disease's impact on every cell in the body. Now, you can! We introduce MouseMapper, an AI tool to reveal system-wide disease perturbations. MouseMapper showed obesity-induced changes in facial nerves & body-wide inflammation ππΌπ§΅ https://t.co/2sPQra70xx
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I'm excited to introduce MouseMapper, an AI tool I've been working on in the past months, that enables us to study whole body changes in mice! Check out @erturklab's tweetorial about what we did, and why it matters!
Imagine seeing a disease's impact on every cell in the body. Now, you can! We introduce MouseMapper, an AI tool to reveal system-wide disease perturbations. MouseMapper showed obesity-induced changes in facial nerves & body-wide inflammation ππΌπ§΅ https://t.co/2sPQra70xx
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Super excited to share our latest preprint with you π€© We've tackled the challenge of visualizing obesity-induced changes in peripheral nerves and immune cells on the whole-body scale and developed an AI-powered pipeline to precisely quantify these changes.
Imagine seeing a disease's impact on every cell in the body. Now, you can! We introduce MouseMapper, an AI tool to reveal system-wide disease perturbations. MouseMapper showed obesity-induced changes in facial nerves & body-wide inflammation ππΌπ§΅ https://t.co/2sPQra70xx
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Excited to be a part of the team behind MouseMapper! π Our new AI tool uncovers how diseases like obesity impact the body at a cellular level, from facial nerves to widespread inflammation π§«π¬ Check our preprint ππ»
Imagine seeing a disease's impact on every cell in the body. Now, you can! We introduce MouseMapper, an AI tool to reveal system-wide disease perturbations. MouseMapper showed obesity-induced changes in facial nerves & body-wide inflammation ππΌπ§΅ https://t.co/2sPQra70xx
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Very excited to share our newes preprint! A holistic view of the impact of a disease on the whole body on the cellular level!
Imagine seeing a disease's impact on every cell in the body. Now, you can! We introduce MouseMapper, an AI tool to reveal system-wide disease perturbations. MouseMapper showed obesity-induced changes in facial nerves & body-wide inflammation ππΌπ§΅ https://t.co/2sPQra70xx
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π©ΈBlood vessels! Happy to present two of our vessel papers recently accepted at MICCAI24 - π€π‘"Simulation-Based Segmentation of Blood Vessels in Cerebral 3D OCTA Images" https://t.co/afenZXMnfU - ππ"3D Vessel Graph Generation Using Denoising Diffusion" https://t.co/TsXEIQeCHu
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What if we could map every cell in the body, revealing its location and molecular identity? In this @NatureMethods perspective, we discuss the new era of 3D-omics by tissue clearing and AI, called Deep 3D Histology: https://t.co/iXRJ5GrpV3 PDF: https://t.co/fiR3wBonDe π§΅ππΌ
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The July issue is live today! https://t.co/WkJdk9BPCS The beautiful cover comes from the @erturklab and shows c-Fos+ neuronal mapping in whole mouse brains. See paper: https://t.co/dOaFfRzyLj
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