Hannah Pliner
@HPliner
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Data scientist in single cell genomics at @BrotmanBaty and @uwgenome
Seattle, WA
Joined March 2015
RT @coletrapnell: Four years' work, 178 billion sequencing reads, and nearly 5 million cells went into constructing atlases of gene express….
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RT @joselmcfaline: I am very happy to share the official announcement!!! I look forward to starting my lab @ColumbiaBME. .
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RT @coletrapnell: Happy to report that our paper on using UMAP to analyze many mutants is now out in Nature Communications .
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RT @lea_starita: As the molecular team behind the @seattleflustudy, @debnick60 and I are excited to begin COVID-19 community testing in par….
seattleflu.org
Learn more about the Seattle Flu Study and the Greater Seattle Coronavirus Action Network (SCAN).
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RT @HelenChuMD: It’s official. @seattleflustudy has shifted focus to supporting public health response to #COVID19 to launch SCAN for home….
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RT @trvrb: Thanks to @seattleflustudy and @UWVirology, we have new genomic data on the spread of #COVID19 in Washington State with 2 new #S….
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RT @coletrapnell: Our paper studying how to infer gene regulatory networks based on single-cell RNA-seq data is out today in Cell Systems:….
cell.com
Qiu et al. present Scribe (https://github.com/aristoteleo/Scribe-py), a toolkit for detecting and visualizing causal regulatory networks between genes in diverse single-cell datasets. They use Scribe...
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RT @trvrb: The team at the @seattleflustudy have sequenced the genome the #COVID19 community case reported yesterday from Snohomish County,….
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RT @briansearle: The new paper from @lkpino and @MacCossLab has been really impactful on my work. Easily drawing full calibration curves fo….
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RT @katyac_h2o: @SRsrivatsan just published his first Ph.D. paper (, a culmination of endless perseverance, incred….
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RT @coletrapnell: Extremely excited to announce sci-Plex, described in a new paper out today Joint work with @JShe….
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RT @AllenInstitute: How do we grow from a single cell to the trillions of cells that make up an adult body? A new @DR_E_A_M Challenge, spea….
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RT @coletrapnell: Our manuscript on Garnett, which allows you to rapidly annotate cells by type in your scRNA-seq data, is now out in Natur….
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RT @m_hemberg: News! Garnett and CellAssign are out in @naturemethods . Views! They both look great! Read more here .
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RT @yeastyin: Happy to share our sci-L3 (previously called sci-LIANTI), which stands for "single-cell combinatorial indexing", "linear ampl….
cell.com
Yin et al. developed sci-L3, which combines a scalable single-cell barcoding scheme with linear amplification. The method flexibly enables single-cell whole-genome sequencing, targeted DNA sequenci...
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RT @coletrapnell: A new study led by @joselmcfaline is now out in @NatureGenet: José used single-cell RNA-seq and….
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RT @lkpino: DONE! I defended in July, today I submitted my #PhD thesis! In Sept I start a #postdoc with Prof Ben Garcia at @PennEpiInst 👩🔬….
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