Stephen Doyle
@stephenrdoyle
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UKRI Future Leaders Fellow & Group Leader @ Wellcome Sanger Institute. Molecular & computational biology of worms of humans and animals. Aussie dad of 🧒+👶^2.
Cambridge, England
Joined December 2015
Check out our latest work led by the very talented PhD student @MarinaPapaiak on the genomic diversity of soil-transmitted helminths. Lots of neat results and implications for molecular diagnostics moving forward. Lots more coming from us in this space! 👇
Our preprint is now out on BioRxiv! #STHs #worms #diagnostics #helminths
https://t.co/WD7pQyxwvK ⁉️ How are parasitic worms linked globally, and how reliable are our current diagnostic targets and qPCR assays? Let me take you through a journey 🧵 1/
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I am hiring! - looking for a Staff Scientist to co-run my research group with me. Staff Scientist is a senior professional scientist role at EMBL. Please forward to people you might know who could be interested!
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Very excited to be heading to Curitiba, Brazil, for @waavp 2025! Lucky enough to be invited to give a keynote, and will talk about progress and prospects of using genomics and transcriptomics in the "real-world" of parasitology. Looking forward to some interesting discussions!
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🚨We are hiring : Assistant Research Officer- Genomics and Bioinformatics!🚨 Join our team and be part of research contributing to public health innovation. 📍 Kilifi, Kenya 🗓️ Sunday, August 24th, 2025 🔗 https://t.co/luNLaNGK2k
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Pretty awesome to contribute to a permanent exhibit at the @NHM_London, esp during a PhD. Super job promoting parasitic worms and championing women in science @MarinaPapaiak 🤩 https://t.co/9n7EHTFXye
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⭐ Excellence fellowships accepting applications ⭐ for Black ECRs who have a degree from the UK. https://t.co/cjNw76v2PB I have an amazing spatial transcriptomics project available on the world's most important pathogen 🦠, TB: https://t.co/maM8Izjw7p Please reach out!
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I am proud to see our latest work on hybridisation capture in soil-transmitted helminths, led by PhD student @MarinaPapaiak , now published in Molecular Ecology Resources. I am looking forward to scaling this up into larger populations. In the meantime, 🥳 https://t.co/0kufKTnWKM
onlinelibrary.wiley.com
New approaches are urgently needed to enrich rare or low-abundant DNA in complex samples. Soil-transmitted helminths (STHs) inhabit heterogeneous environments, including the gastrointestinal tract...
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Our team is hiring an ambitious senior bioinformatician to look at bacterial capsules . This position will closely collaborate with @emblebi
@StephenBentley5 @johnlees6 @stephlo_lo Closing date: 20 July 2025 https://t.co/pujNp7xiKg
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Four more days to apply for postdoc and ML research scientist positions in my lab at @sangerinstitute at intersection of AIxBio
🚨 We’re hiring @sangerinstitute! Join us as a Postdoc or ML Scientist to build generative & foundation models for biology. 🧬 Spatial + single-cell omics 🧠 Diffusion, transformers, multimodal data 💊 Drug discovery via Open Targets Apply: Postdocs in computational biology
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Home https://t.co/No1X7fLq1v Dear colleagues, the deadline for submitting abstracts to the Molecular Helminthology 2025 conference is extended to July 14th. Abstracts will be reviewed & decisions made by July 21st. The upload link has been re-activated and awaits your submission!
sites.wustl.edu
A website by WashU Sites
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Only a few days left to apply to become a group leader in our Generative Biology programme at @sangerinstitute
https://t.co/g7sgCt53uK
sanger.ac.uk
We are a world-leading genomics research institute in Cambridge. Our work helps improve human health and understand life on Earth
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Everyone busy and happy working and learning on sequencing & analyzing genomes at the Helminth Bioinformatics Couse @ConnectingS @GeneticaFmed @InstitutodeHig1 @stephenrdoyle @LKamenetzky @IriarteXXI @MarinaPapaiak @sfontenla1 @belamalta10 @annaprotasio
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Job advert - Please share! Mark Viney ( https://t.co/stCzh4mnkJ) and I are seeking a motivated postdoctoral fellow to work on drug treatment responses of soil-transmitted helminth and hookworm genomics in Southeast Asia. Do reach out if keen! https://t.co/hZOlKvvK96
lnkd.in
This link will take you to a page that’s not on LinkedIn
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🚨 We’re #hiring a Staff Scientist to drive innovative computational workflows for large-scale, multi-omics data in human microbiome research @LawleyLab @sangerinstitute 📅 Closing date: 27th April 2025 📢 Please share & apply! https://t.co/RFTeEqru47
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We have a post open in @SchistoTrack as our fantastic facilitator moves on to new endeavours. Join us to support the cohort & work v. closely w/ our Ugandan team while enabling exciting morbidity research! Deadline midday 25 April. https://t.co/haQwoXPotx
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Very excited to see our latest work, led by @MarinaPapaiak , up on @biorxiv_genomic ! Enrichment of helminth mitochondrial genomes from faecal samples using hybridisation capture https://t.co/BVofwvEDhL Thread below. More to come 😎 👇
Our preprint is now out on BioRxiv! https://t.co/k2L8HMhsdE ⁉️How can we enrich helminth signal directly from 💩 to help us study worm populations? 🪱 1/🧵
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Two weeks to registration deadline. Come join us at Parasitic Helminths 2025!
Registrations are now open for Parasitic Helminths 2025! https://t.co/GNPEAKgu7g and for the very first time will host a special mini-symposium on Plant-Parasitic Nematodes 😍🌱🪱 Hope you will join us, @lderevnina and I are looking forward to seeing you there!
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Less than one week to apply - deadline 25th of Feb! If you are from Latin America, work on helminths, and are interested in genetics/bioinformatics, this could be a great opportunity for you 👇
Are you based in South America and work on helminths? Join me & a great group of instructors on the Helminth Bioinformatics course in Montevideo during 18–24 May! We'll cover expenses, you just need to come, interact, and learn. Please share & apply! https://t.co/BRJfvXeYZW
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Are you based in South America and work on helminths? Join me & a great group of instructors on the Helminth Bioinformatics course in Montevideo during 18–24 May! We'll cover expenses, you just need to come, interact, and learn. Please share & apply! https://t.co/BRJfvXeYZW
coursesandconferences.wellcomeconnectingscience.org
Practical hands-on training in helminth genome analysis
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Any suggestions for tracking worms like C.elegans and other things from live imaging fluorescence data? Would like an open source tool.
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