Li Song
@mourisl
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毛利元光. Assistant Prof.. Bioinfo, algorithms. @BioMedDataSci. PostDoc @XShirleyLiu @lh3lh3 @dfcidatascience. PhD @JHUCompSci. https://t.co/zRfJOaf6gD #hiring
Lebanon, NH, USA
Joined August 2009
BIG surprise from #RECOMB2024 ! What an honor to receive the best paper award! Thanks @RECOMBconf for this wonderful conference with so many interesting talks and posters, and @BenLangmead for many insightful discussions! (Full paper link :D
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RT @aquaskyline: Side project becomes a breakthrough. Recovering information stored in DNA after hundreds of years of degradation is now mo….
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RT @StevenSalzberg1: We're still not finding any good evidence for a microbiome in any cancer type: see our new paper in @ScienceTM led by….
science.org
Two analyses of microbial DNA in tumor samples aim to put controversy-riddled field back on track
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RT @aquaskyline: On behalf of the program committee, it is my heartfelt honor to invite you and your teams to join us at GIW/ISCB-Asia 2025….
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RT @jmschreiber91: In the genomics community, we have focused pretty heavily on achieving state-of-the-art predictive performance. While u….
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RT @YiMaTweets: Our latest book on the mathematical principles of deep learning and intelligence has been released publicly at: https://t.c….
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RT @BrendanNyhan: New job ad: Assistant Professor of Quantitative Social Science, Dartmouth College Please share w….
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RT @anshulkundaje: @jengreitz & I are looking to hire a computational biologist/biostatistician with project management expertise to collab….
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RT @yixiaobio: My postdoc preprint is online now! We revealed GSX2 as a target of mutant IDH in glioma. Check full text below.
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RT @jim_elevator: skani v0.3.0 is released. * 30-40% potential reduction in memory .* Breaking changes to indexing….
github.com
Fast, robust ANI and aligned fraction for (metagenomic) genomes and contigs. - bluenote-1577/skani
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RT @XiuweiZhang: @GarmireGroup, Joshua Levy (Cedars-Sinai) and myself are organizing a workshop on "Advances of AI methods in single cell s….
sites.google.com
This workshop will bring together researchers developing and applying artificial intelligence to analyze spatially resolved single-cell data, including spatial transcriptomics, proteomics, and...
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RT @LabWelch: Our paper is now in @NatureBiotech! Topological velocity inference from spatial transcriptomic data. TopoVelo infers the dire….
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RT @StevenSalzberg1: Uh oh: deep learning models in genomics lose badly to very simple linear models. Could they have been over-hyped? (new….
nature.com
Nature Methods - The analysis presented in this Brief Communication shows that, despite their complexity, current deep learning models do not outperform linear baselines in predicting gene...
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RT @aquaskyline: Clair3 now natively supports using GPU with CUDA or Apple Silicon to speed up calling in v1.2. using either a 4090, or a M….
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RT @minilek: Terence Tao, perhaps the most famous living mathematician, explains the damage the recent grant cuts to UCLA has caused especi….
mathstodon.xyz
The current administration in the US has, through various funding agencies such as the NSF and NIH, has recently suspended virtually all federal grants to my home university, UCLA (including my own...
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RT @octonion: Terence Tao has written a thread on Mathstodon about the damage being caused by the grant freezes at UCLA. .
mathstodon.xyz
The current administration in the US has, through various funding agencies such as the NSF and NIH, has recently suspended virtually all federal grants to my home university, UCLA (including my own...
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RT @lh3lh3: Longdust, a new tool to identify highly repetitive STRs, VNTRs, satellite DNA and other low-complexity regions (LCRs). Similar….
github.com
Identify long STRs, VNTRs, satellite DNA and other low-complexity regions in a genome - lh3/longdust
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RT @saizhang0: Excited to share that scPRS is now out @NatureBiotech! We developed a new single-cell-resolved #PRS using deep learning. htt….
nature.com
Nature Biotechnology - A graph neural network framework enables individualized genetic risk prediction at the single-cell level.
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RT @TimothyPJenkins: Thrilled to announce our paper, "De novo-designed pMHC binders facilitate T cell-mediated cytotoxicity toward cancer c….
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RT @StevenSalzberg1: check out our new @eLife paper, led by @KuanHaoChao along with @alan_mayonnaise, @anqi_liu33, @elapertea: OpenSpliceAI….
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