Fernando Rabanal
@malacopa_genome
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Postdoc in the Weigel lab at @MPI_Bio . Ribosome Heterogeneity | Genome Evolution | Repeats | Herbicide Resistance. Also as @GenomeEvolution.bsky.social
Joined November 2016
New paper in @PNASNews : “Standing genetic variation fuels rapid evolution of herbicide resistance in #blackgrass”. Led by @Kersten_Sonja at @plantevolution lab, in collaboration with @christiandhuber @kjschmid @YvesVandePeer & colleagues from @BASF .
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RT @ChengRuei_Lee: Finally published~!. 1. Strong evidence of adzuki domestication in Japan.2. The Jomons are not m….
science.org
Adzuki is a central legume in East Asian culinary culture, yet its domestication origin remains debated. Using ~700 accessions across Asia, we show that the initial domestication happened three to...
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RT @LabSchneeberger: 📢 Excited to share our work out now in @Nature! 📢 . We present the phased pan-genome of the European tetraploid potato….
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RT @uurquiza: Abundant clock proteins point to missing molecular regulation in the plant circadian clock | Molecular Systems Biology https:….
embopress.org
imageimage~100,000 copies of plant circadian clock proteins per cell were predicted from RNA levels and included in detailed models. Protein levels and DNA-binding were validated, using NanoLUC...
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RT @el_Dr_Barrera: 🧬 MSc & PhD opportunities in evolutionary genomics!. Join my lab at Cinvestav Irapuato to develop projects around:. - Ta….
josuebarrera.owlstown.net
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RT @abousios: Beautiful collaboration led by Tetsuji Kakutani and Sayuri Tsukahara on unravelling the fine changes that can make a centroph….
nature.com
Nature - An Arabidopsis long terminal repeat retrotransposon integrates de novo into regions occupied by centromere-specific histone variant, showing the impact of centromeric chromatin on...
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RT @hendersi: Natural variation modifies centromere proximal meiotic crossover frequency and segregation distortion in Arabidopsis thaliana….
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RT @Polina_Novik: This work follows a 15K young allotetraploid Arabidopsis suecica through its origin and evolution along a polyploid cycle….
biorxiv.org
Polyploidization or whole-genome duplication (WGD), followed by genome downsizing is a recurring evolutionary cycle with a significant impact on genome structure. Polyploidy originates from a cell...
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RT @HajkDrost: Does the aggregation of complex multicellularity follow a universal developmental pattern across the eukaryotic tree of life….
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RT @Vikram_Alva: Excited to share our team's discovery on tissue-like multicellularity in archaea under mechanical compression! Led by @the….
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RT @dr_borg: Preprint alert 🚨 As we gear up to share out exploits in red algae, we took a detour down the green lineage to piece together t….
biorxiv.org
Epigenetic silencing is essential for regulating gene expression and cellular diversity in eukaryotes. While transposable elements (TEs) are mostly silenced with DNA and H3K9 methylation, gene...
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RT @dr_borg: I wrote a Quick Guide on Red Algae for @CurrentBiology, check it out for some beautiful images ❤️.
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RT @BenoitNabholz: Our preprint has been positively reviewed by elife! We found no effect of effective population….
elifesciences.org
A large-scale survey across animals reveals no general association between genome size expansion and the relaxation of natural selection.
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RT @hendersi: Retrotransposon addiction promotes centromere function via epigenetically activated small RNAs.@Natur….
nature.com
Nature Plants - Centromeric satellite repeats on Arabidopsis chromosome 5 are interrupted by ATHILA5 retrotransposons, and cohesion is compromised in ddm1 chromatin remodelling mutants that have...
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RT @richard_durbin: Gene Myers just released super fast whole genome aligner He and @c1zhou and I have lots of ide….
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RT @marce_save: It’s finally out!! 🥳 Our paper on the recovery of ancient chromosomes and 3D genome structure of a 52,000 year-old woolly m….
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RT @zhonglab: Our latest preprint on the mechanistic origin and evolution of CHH DNA methyltransferase CMT2 and how it diverged from CMT3 t….
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RT @LabMutwil: Let's try something new: .I am looking for bioinfo collaborators that know how to analyze DNA methylation, lncRNA and sRNA d….
biorxiv.org
Stressful environmental conditions, including heat stress (HS), are a major limiting factor in crop yield. Understanding the molecular mechanisms of plant stress memory and resilience is important...
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RT @Slotkin_Lab: So proud of my lab for our latest work out today in @Naturepub. We took advantage of transposable elements and CRISPR to p….
nature.com
Nature - Fusion of rice Pong transposase to the Cas9 or Cas12a programmable nucleases provides sequence-specific targeted insertion of enhancer elements, an open reading frame and gene expression...
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RT @ulrich_lutz: Excited about our second preprint! In this POC study, we employed our panspecific flc mutants and identified cryptic varia….
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RT @hendersi: H3K4me1 recruits DNA repair proteins in plants interesting findings! @Grey_Monroe @ThePlantCell.
academic.oup.com
DNA repair proteins preferentially repair regions with the epigenomic feature H3K4me1, resulting in mutation rate heterogeneity in plants.
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