Reviewed a nice #CryoET paper in journal club today and it got me wondering... @ScienceMagazine has a very clear policy on data and computational methods. Why isn't this policy upheld for the #CryoEM and #TeamTomo communities? #OpenSoftwareAcceleratesScience

Arctica pumping out great data! This is a ~130KDa membrane protein from @TheCHLeeLab and Relion4 on-the-fly align it very well! #OpenSoftwareAcceleratesScience (And of course GoldGrids for best imaging!)

10. Fast and easy-to-use #GPU-powered software! In 2022, we delivered updates that made our software more intuitive, faster, and more powerful. And we also updated our open API, because we believe that #OpenSoftwareAcceleratesScience.

After some Python tinkering (pun intended) we have rln4 on the fly running! Real happy. Thanks to @SjorsScheres @ColinMPalmer @Guillawme @AlisterBurt for being open source enthusiasts and allow others to use their code. #OpenSoftwareAcceleratesScience

This brings me an enourmous amount of joy. Thanks @SjorsScheres @biochem_fan & team. #OpenSoftwareAcceleratesScience

I remember reading his Paper about tau filaments and Cryo-em before I joined EMBL as a PhD student. Now I have the honor to listen it in Person. @instructhub @SjorsScheres #OpenSoftwareAcceleratesScience

Why are we still permitting publication methods that don't provide source code and are hosted on non-functional servers? For me, this is one of the biggest issues in structural biology. #OpenSoftwareAcceleratesScience

Good memories from the @BirkbeckUoL🦉/ @ismb_london for the @EMBO practical course for #cryoEM ❄️🔬. The next generation learned data processing with @cryosparc's Rich & Hannah, #RELION with Sjors (#OpenSoftwareAcceleratesScience). Processing #CryoEM data ? Then #TryEverything👨‍💻

Today we started discussing about hardware/software needs and setup for cryoEM. Nice talk by colleagues @jelykar from @AarhusUni and Stefan from @scilifelab, @Stockholm_Uni. Last slide about Free Software! #OpenSoftwareAcceleratesScience

Spectacular talk by @GrantCryoEMLab @UWBiochem about news on cisTEM! All test data is freely available at #EMPIAR! #OpenSoftwareAcceleratesScience #SharingIsCaring

Finally, all the data processing was done with ctfind4 and Relion31 because we firmly believe #OpenSoftwareAcceleratesScience

Encountered any issues? Have suggestions or want to contribute? Check out the GitHub page or contact me directly. I hope this update proves helpful and streamlines your daily data processing! As always, #OpenSoftwareAcceleratesScience. Repo link:

In addition to just thinking the work is cool, I'm really proud of the symbiotic relationship https://t.co/vjOLZWdye6 has developed with the Lucas lab over the past year while they built their extensible implementation of 2DTM #OpenSoftwareAcceleratesScience

The code will be fully open-source under BSD-3 license after a closed beta where we'll test and debug in a few different contexts and polish the overall experience. #OpenSoftwareAcceleratesScience

Finally, the optimized #Python code should work faster, and changes to the @GoHugoIO server allow smooth operation from remote workstations. The code, as always, is #opensource because #OpenSoftwareAcceleratesScience! 5/6

@SjorsScheres @naturemethods We are sorry for our ignorance. The source code of THUNDER hosted on Github has changed to GPL v2 license. We do agree on #OpenSoftwareAcceleratesScience. As RELION is one the pioneers in cryoEM image processing, we believe that every follower did learn from RELION.

Right tag is #OpenSoftwareAcceleratesScience

Great stuff! Suggestion: use Relion5,it will extract all available information specially if you have a mixture of free subunits/ribosome/ribosomes with/without factors. Do not hesitate to reach out should you need help. #OpenSoftwareAcceleratesScience

https://t.co/8I4b1BtOLu manuscript accepted! The final version will be coming out soon and the code will be made public at that point. Stay tuned! We've been working on the docs and install process to make it easier to use. #CryoEM #Automation #OpenSoftwareAcceleratesScience

this would've impossible to get working so quickly without the mrcfile package from @ccp_em - #OpenSoftwareAcceleratesScience