djinnome
@djinnome
Followers
251
Following
5K
Media
16
Statuses
540
I am a computational biologist applying causal AI to develop multi-scale scientific simulations that learn from data to answer prognostic and diagnostic queries
Joined January 2009
We've opened a new Postdoctoral Fellowship on *Whole-Cell Model-Driven Gene Function Discovery* jointly with Eran Agmon's group at @uconnhealth. Looking for a high-impact postdoc in computational biology? Learn more:
0
1
3
"I can't think of a better use case for artificial intelligence than solving hundreds of terrible diseases" Google DeepMind CEO Demis Hassabis says the AlphaFold AI system has the potential to revolutionize medicine and create "enormous commercial value" https://t.co/thiTPkHU7H
11
41
197
Explain to me how this TikTok’r gets it and “public health experts” don’t. MDs don’t. Share widely on multiple platforms. Shout out to @michael_hoerger for breaking through to the younger generation. h/t @sasswashere for alerting me to this most excellent video.
516
3K
8K
End/🧵Read our full paper for a deep dive into our methods and findings. We'd love to hear your thoughts and engage in further discussions about how we can apply this work!
arxiv.org
Inferring causal relationships as directed acyclic graphs (DAGs) is an important but challenging problem. Differentiable Causal Discovery (DCD) is a promising approach to this problem, framing the...
0
1
3
1/🧵I’m excited to share recent work on differentiable causal discovery from @AchilleNazaret and me, supervised by @elhamazizi and @blei_lab. Open the thread for a brief tweetorial (Xtorial?) of our method. arXiv link: https://t.co/o0Cm764rMq
2
20
95
0
0
0
Congrats to dair-ai/Prompt-Engineering-Guide, which has grown by 555 stars in the last 7 days and has reached 28.7K stars. Thanks to the contributors: @genkan_to @wamuy_u @paulosalem @andrewgazelka @djinnome
https://t.co/qcypZ7gE1l
#python
0
2
2
The most underrated superpower of Generative AI is converting unstructured data to structured data
97
437
5K
It was really fun writing this paper with @mhgarci1 @NathanHillson @chrismungall James Carothers, and others. What is the minimum amount of automation necessary to achieve #selfdrivinglabs?
What is next in AI and science? Check our new paper in Current Opinion in Biotechnology! #AI #syntheticbiology #ML #selfdrivinglabs
https://t.co/8zQdS3LIL7
0
4
6
We're kicking off this project in San Francisco today! I'm very excited to be the PI for the Harvard team incl @cthoyt. We'll work on knowledge assembly and causal modeling for vaccine/pathogen mechanisms, collaborating closely with @djinnome at @PNNLab.
A machine-learning tool predicting the most suitable technologies for a given #pathogen could streamline the #vaccine development process — increasing the rate of success and reducing the number of initial vaccine candidates required. https://t.co/j3NNu1UHQw
0
3
24
A nice article on our work with @DrJeremyTeuton @cthoyt @olgavitek @sara_m_taheri @CoronaWhy @covid19_emmaa on @pnw_ai
1
2
10
Very interesting application of SCMs and counterfactuals for data fusion
Suppose we are interested in counterfactual questions and have access to multiple datasets. When/how can we merge SCMs over distinct but overlapping subsets of variables? Check out our #icml poster (Tue 18:30) "Causal Inference Through the Structural Causal Marginal Problem" 1/n
0
0
0
It sounds unbelievable, but Ukrainian troops surrounded by Russia in Mariupol are still getting equipment and supplies from the mainland
714
5K
43K
"Consilience of causal explanation is the means by which the single mind can travel most swiftly from one part of the communal mind to the other" -- Edward O. Wilson
0
0
1
Get where you want to go, faster ⏩ Discover how the Agile BioFoundry can get you closer to your target molecule by checking out our metabolic map: https://t.co/F5EYmMeyWJ
0
1
2
Do you want to know how the knowledge of #causal relationships is developed? Check out my poster that presents @yudapearl causal epistemology in one place. 👇🏻 RT if it might be useful to others. @causalinf @nickchk @AmJEpi @eliasbareinboim @EpiEllie #epitwitter @EpidByDesign
2
81
251
Here is an alternative to BioRender that is TRULY FREE and actively maintained. Over 1500 vectorized images sorted by license type (all creative commons or MIT). Fully editable icons and soon they will launch an Inkscape library. Please RT. https://t.co/8GFCa5p3A0
github.com
A library of free open source icons for science illustrations in biology and chemistry - duerrsimon/bioicons
30
1K
3K