
A. James Link
@ajlinklab
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Research group at Princeton in Chemical and Biological Engineering
Princeton, NJ
Joined September 2016
RT @VanderbiltCSB: New work from @ZhongyueY, @ajlinklab and Yi-Lei Zhao takes a first step toward structural prediction of RiPPs: lasso pep….
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RT @ZhongyueY: Our first step toward structural prediction of RiPPs: lasso peptide. This tool can be accessed from….
nature.com
Nature Communications - Ouyang et al. present LassoPred, a computational tool to accurately predicts the 3D structure of lasso peptides and offers an accessible online prediction tool to the...
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This is a fun example of how enzymes we find in curiosity-driven natural products research can turn into potentially useful biocatalysts. Congrats to all of the authors!.
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The latest Link lab paper is out @ACSCentSci : ! In this work, led by @bsmchoi and @TobyJohnson144 we show that an ATP-grasp enzyme from #RiPP biosynthesis can be repurposed to cyclize peptides and even proteins!.
pubs.acs.org
Macrocyclic peptides have drawn considerable interest as modalities for drug discovery. Graspetides are a class of ribosomally synthesized and post-translationally modified peptides (RiPPs) that...
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RT @ZhongyueY: Things tend to slow down in winter, but Elsa Ding and Yaoyukun Jiang from our group have engineered a 'cold-adapted' version….
onlinelibrary.wiley.com
This work uncovers molecular determinants of cold adaptation in bidomain amylases by combining MD simulations and biochemical assays, revealing that increased domain separation drives enhanced...
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RT @yitang_ucla: In a year with so little to cheer about so far, I am happy to share our manuscript on a copper-dependent halogenase. Unbe….
nature.com
Nature - A halogenase enzyme uses the copper in its active site to catalyse iterative chlorinations on multiple unactivated carbon−hydrogen bonds, enabling carbon−hydrogen...
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There are 56 predicted cysimiditides scattered around actinobacterial genomes. We originally found some cysimiditides as part of our study on imiditides, linear peptides harboring an aspartimide:
pubs.acs.org
Ribosomally synthesized and post-translationally modified peptides (RiPPs) are a large and diverse class of natural products of ribosomal origin. In the past decade, various sophisticated machine-l...
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The latest Link lab paper is out @BiochemistryACS!: This work, led by Angela Zhu, focuses on the cysimiditides, a new subfamily of #RiPPs. The cysimiditides include a tetracysteine motif that coordinates a zinc ion and a single aspartimide moiety.
pubs.acs.org
Aspartimidylation is a post-translational modification found in multiple families of ribosomally synthesized and post-translationally modified peptides (RiPPs). We recently reported on the imiditid...
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RT @biorxiv_biochem: Cysimiditides: RiPPs with a Zn-tetracysteine motif and aspartimidylation #biorxiv_biochem.
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RT @piel_lab: Congrats to @HubrichFlorian & @sanathrajkk0 for this exciting story finally being published. Thanks for the fruitful collabor….
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RT @NinaHartrampf: Thank you for highlighting our work on the chemoenzymatic synthesis of modified lasso peptides on the covers of @J_A_C_S….
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RT @ZhongyueY: AlphaFold can't tell you the structure of lasso peptide, a major branch of RiPPs and promising antibiotics. Xingyu wasn't ha….
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RT @DrewCarson712: Excited to be at @BostonBacteria at Boston Univ! Looking forward to some great science #BBM2024 🧫 I’m presenting poster….
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RT @NinaHartrampf: Our chemoenzymatic synthesis of the lasso peptide Microcin J25 is out now in @J_A_C_S! We used flow-SPPS to synthesize s….
pubs.acs.org
Many peptidic natural products, such as lasso peptides, cyclic peptides, and cyclotides, are conformationally constrained and show biological stability, making them attractive scaffolds for drug...
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RT @yitang_ucla: Early Announcement!.Together with Brad @BradMoore_SIO, Jaclyn @JMWinterlab, and Alessandra @Eustaq….
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RT @J_A_C_S: Cyclic Peptides from Graspetide Biosynthesis and Native Chemical Ligation | Journal of the American Chemical Society @Princeto….
pubs.acs.org
The ribosomally synthesized and post-translationally modified peptide (RiPP) superfamily of natural products includes many examples of cyclic peptides with diverse macrocyclization chemistries. The...
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RT @isciverse: Cyclic Peptides from Graspetide Biosynthesis and Native Chemical Ligation. @J_A_C_S #Chemistry #Chemed #Science #TechnologyN….
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Then, we use those thioesters to do native chemical ligation and make some interesting cyclic and branched peptide structures. Congrats to Brian and former Link lab senior thesis student Arthur Acuña ‘23!.
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The latest Link lab paper is out @J_A_C_S today led by @bsmchoi: In this work we show that ATP grasp enzymes that usually make esters can also make thioesters.
pubs.acs.org
The ribosomally synthesized and post-translationally modified peptide (RiPP) superfamily of natural products includes many examples of cyclic peptides with diverse macrocyclization chemistries. The...
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