Ajit Johnson Nirmal
@ajitjohnson_n
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Cancer Geneticist @harvard • Tumor Microenvironment | Spatial Biology | Computational | Multimodal Data Integration • PI @nirmallab
Boston, MA
Joined February 2012
Excited to see our work finally out in @naturemethods! Amazing work led by Clarence Yapp, @ajitjohnson_n and all co-authors @alexwong2023 @JuliannTefft @LlopisMontero @SantagataMDPhD @sorger_peter @Harvard_Lab. Check it out
Highly multiplexed 3D profiling of cell states and immune niches in human tumors @naturemethods @harvardmed 🇺🇸 https://t.co/nJ4EQtJYL5
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How can we bridge observational spatial biology with functional characterization—bringing together experts in spatial, systems, and synthetic bio! Join NCI for virtual workshops on May 13, 15 & 20 (12–4PM ET) 📅 Register: https://t.co/u7OAGoTcr0
#SynSysBio4SpatialCancerResearch
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Jumping on the trend to see what ChatGPT thinks my life looks like! Wish I had that view, though ;) GPT: Here is an illustration capturing your life as a cancer biologist. It reflects the advanced lab environment, collaborative spirit, and your commitment to impactful research.
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🔬 Join our Harvard BWH lab! We’re hiring a Senior Research Tech with: - Strong wet lab skills 🧬 - Expertise in immunofluorescence imaging 🔬 - Bonus: scRNA-seq & CRISPR experience 🔍 Know someone or interested? Please send your CV to nirmallab@bwh.harvard.edu. Please share!!
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Thrilled to join the MGB Commercialization and Inclusive Leadership Program! This initiative is about creating an inclusive innovation ecosystem, exploring commercialization opportunities, and fostering community building. Let's drive change together! #CILP2024 @MGBInnovation
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We’ve been using #scimap for over 5 years and never got to publishing it. Thanks to #JOSS, we finally did! Highly recommend the journal. Scimap has over 10K active users per month visiting the website, and now people using it have a way to cite it 🎉
🧵 Excited to share our recent publication: SCIMAP: A Python Toolkit for Integrated Spatial Analysis of Multiplexed Imaging Data! 📊🧬 SCIMAP has been pivotal in our lab for analyzing multiplexed imaging spatial data, enabling several high-impact studies.
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A "poor man's version" of viewing 3D data generated by Alex Wong and Clarence Yapp 🔬🎥 Welcoming donations of Apple Vision Pro 😉👓
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ICYMI in @CD_AACR - work by #AACR24 plenary speaker @sorger_peter: The Spatial Landscape of Progression and #Immunoediting in Primary #Melanoma at #Singlecell Resolution https://t.co/0kHo11n3Nj
@ajitjohnson_n @harvardmed @NCIHTAN
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I am excited to share that I will be presenting at the Festival of Genomics & Biodata in Boston (June 12-13). Let's chat if any of you are around. #FOGBoston Event:
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Brigham @BrighamResearch is the number 1 hospital worldwide for research impact, according to @Nature. Honored to be a small part of it.
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More exiting research brewing ☕️
🌟 Excited to learn that we have received the "Team Science" award from @MelanomaReAlli with @dliu_ccb, @rhaq1, and Dr. Steve Hodi! 🎉 Looking forward to some exciting work in the space of immuno-oncology. 🔬💡
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The data analysis tutorials we released yesterday received over 5K unique page visits 👀🌍. Glad to see so many spatial biology enthusiasts 🧬🔬.
🚀 We've just OPEN-SOURCED a series of tutorials (over 15) on multiplex image analysis 🎉 Perfect for those venturing into spatial biology or working with CODEX, MxIF, CyCIF, mIHC, MIBI, IMC, and related data types 🧬. We hope, it contributes to your work! https://t.co/nkHEhtYgbl
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Resource for folks interested in spatial biology data analysis ⚠️
🚀 We've just OPEN-SOURCED a series of tutorials (over 15) on multiplex image analysis 🎉 Perfect for those venturing into spatial biology or working with CODEX, MxIF, CyCIF, mIHC, MIBI, IMC, and related data types 🧬. We hope, it contributes to your work! https://t.co/nkHEhtYgbl
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🌟 Excellent presentation by our lab member, Sara Filler, on our ongoing research into the precancerous stages of melanoma. 🔬🧬 #Melanoma #SpatialBiology
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🌟 We're on the hunt for a passionate and innovative computational Postdoctoral Fellow to join our dynamic team! 🔬 Cutting-edge projects 🤝 Collaborative environment 🚀 Boost your career Apply now: https://t.co/ioDBxYymUi
#PostdocJobs #CompBio #SpatialOmics #ScienceCareers
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Happy New Year to everyone! May this year bring new opportunities, achievements, and discoveries for all of you. Cheers to a wonderful year ahead! 🎉🎆
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