Sara Simmonds 🧬
@SeSimmonds
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Staff Computational Biologist @cziscience | PhD Biology | Follow for the latest in #compio related to #cellbio #AIxBio
Boston, MA
Joined July 2012
RT @ChanZuckerberg: 🚨 Just dropped: A powerful AI model to explore cells. Meet TranscriptFormer — trained on 112M cells from 12 species. It….
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What a great summary!.
The first cross-kingdom “GPT for cells.” 🤖🦠. TranscriptFormer reframes a single-cell atlas as a generative, cross-species language model that jointly predicts which genes appear and how much they’re expressed.
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📢 Exciting update from CZ CELLxGENE now supports data from an expanded range of organisms beyond human and mouse. This is just the beginning—we're continuously adding support for more organisms. 🪰🐟🪱🐷🐰🐵🦍.
cellxgene.cziscience.com
Find, download, and visually explore curated and standardized single cell datasets.
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RT @cziscience: “The Billion Cells Project will help clarify our understanding of the fundamental biology underpinning human health + disea….
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RT @StephenQuake: Virtual cell models have the potential to transform biological research. Today @ChanZuckerberg released an initial set of….
chanzuckerberg.com
We’re making it easier for biologists and machine learning researchers to collaborate with cell models that are easy-to-use + build upon to accelerate the next big breakthrough.
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RT @lohmueller: I'm excited to announce a tenure track faculty position in conservation genomics in EEB @UCLA! We're looking for candidates….
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RT @loicaroyer: 🚨Big news! Five years in the making, our Zebrahub paper is now published in #Cell 🎉. We’ve built a timecourse atlas of zebr….
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RT @loicaroyer: 📡🧵 Excited to release two #bioRxiv preprints! .The first preprint is: "Zebrahub-Multiome: Uncovering Gene Regulatory Networ….
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RT @loicaroyer: 📡🧵 Excited to release our preprint: Ultrack: Pushing the Limits of Cell Tracking Across Biological Scales. .
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RT @cziscience: Spatial mapping provides key insights into tissue architecture, gene expression + key patterning events in development & di….
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RT @AaronPomerantz: Exciting to see this out! A collaborative effort with @cziscience and @nanopore to offer the research community a free,….
biorxiv.org
Metagenomics has enabled the rapid, unbiased detection of microbes across diverse sample types, leading to exciting discoveries in infectious disease, microbiome, and viral research. However, the...
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RT @cziscience: 🚨 New preprint 🚨. Our CZ ID team + @czbiohub highlight the platform’s new antimicrobial resistant (AMR) module, which enabl….
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RT @ruimcosta: Yesterday I had the pleasure of sitting down with @StephenQuake, Amy Herr, @PepperMarion, and @JShendure for a special panel….
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RT @czbiohub: 📢Announcing the first-ever Chicago BioEngineering Conference! #CZBiohubCHI will bring together scientists in advanced sensing….
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RT @czbiohub: The CZ Biohub Network is pleased to welcome the biomedical & AI expertise of 3 new members to our Board of Directors: .🌟Sam A….
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RT @cziscience: #SingleCell researchers: did you know you can download + visually explore data from 1200+ datasets, spanning 789+ cell type….
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RT @senjutisaha: First single cell data in, by, from #Bangladesh! Contributing to the @humancellatlas! Just the beginning. More to come fro….
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RT @NoahHull_PhD: 🧬 First days at the @CZbiohub & @APHL Genomic Epidemiology course in the Republic of Georgia 🇬🇪 with the Lugar Center, @N….
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RT @satijalab: Want to hear about the latest updates/new techniques in single cell and spatial genomics? Check out the full agenda for our….
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RT @alexrives: AI for biology has the potential to help solve some of the most important problems facing our society. Scientific openness w….
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