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Stephen Quake Profile
Stephen Quake

@StephenQuake

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5K
Following
452
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53
Statuses
431

Professor of #bioengineering and Applied Physics @stanford Prolific inventor at the nexus of #biology, #physics, and #tech

Joined March 2021
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@ChanZuckerberg
Chan Zuckerberg Initiative
4 months
“It’s going to be a very powerful tool for understanding what goes wrong in disease,” says @StephenQuake. “Our goal is to create computational tools so that cell biology goes from being 90% experimental and 10% computational to the other way around.”
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nature.com
Nature - Several groups hope to develop artificial-intelligence models that can predict how cells behave.
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@StephenQuake
Stephen Quake
5 months
Honored to be elected a Fellow of the @royalsociety. Grateful for the collaborators and mentors who’ve made this journey possible, and proud to keep pushing science forward.
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royalsociety.org
Over 90 outstanding researchers from across the world have this year been elected to the Fellowship of the Royal Society, the UK’s national academy of sciences.
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@EricTopol
Eric Topol
7 months
What is considered to be the holy grail of biology—the virtual cell—now has potential for being actualized. https://t.co/q0iT52kazS
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@StephenQuake
Stephen Quake
7 months
Preprints have transformed how we share research. Now, openRxiv is poised to elevate preprint infrastructure with sustainability and researcher-led governance. #OpenScience https://t.co/Pt4ZYFGtJm
chanzuckerberg.com
An interview with openRxiv Board Chair Scott Fraser.
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@StephenQuake
Stephen Quake
9 months
Attribution to: Christopher Prentiss Michel Artist-in-Residence National Academies of Sciences, Engineering & Medicine
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@StephenQuake
Stephen Quake
9 months
Honored to have this incredible portrait by the talented @chrismichel, who captures the essence of “The New Heroes” – scientists shaping our world.
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@StephenQuake
Stephen Quake
9 months
Each year, I share a favorite book with my @cziscience team. This year is Cork Dork by @bbosker. A fascinating exploration of the world of wine, it inspires an appreciation for the neuroscience of taste and the passionate pursuit of knowledge. #CZIScience #teamgift #wine
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@StephenQuake
Stephen Quake
10 months
Joe DeRisi has been busy! From SARS-1 identification to increasing the clinical utility of metagenomic tools, he’s being honored with the @StanfordMed Arthur Kornberg & Paul Berg Lifetime Achievement Award—well deserved! https://t.co/00pKRKfabJ
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@StephenQuake
Stephen Quake
10 months
Tabula Sapiens 2.0, a reference atlas with >1.1 million cells from 28 human tissues, reveals insights into transcription factor expression, cell senescence, & sex-specific gene expression. Explore the findings:
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biorxiv.org
The Tabula Sapiens is a reference human cell atlas containing single cell transcriptomic data from more than two dozen organs and tissues. Here we report Tabula Sapiens 2.0 which includes data from...
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@StephenQuake
Stephen Quake
10 months
Cross-pollinating people and ideas between countries is key to solving scientific challenges, which is why we are partnering with the @ss_f_official to bring great scientific talent to the U.S. and Japan through a new fellowship
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czbiohub.org
Apply for the new international postdoctoral fellowship program from the CZ Biohub Network and Stellar Science Foundation.
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@StephenQuake
Stephen Quake
10 months
This year we worked with scientists & #AIML experts to create a vision for the future of virtual cells. Now in @CellPressNews, the vision shares a roadmap for large-scale, collaborative research on AI-supported virtual cells. This is just the beginning
cell.com
Advances in AI and omics enable the creation of AI virtual cells (AIVCs)—multi-scale, multimodal neural network models that simulate molecules, cells, and tissues across diverse states. This vision...
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@StephenQuake
Stephen Quake
10 months
Excited to get ski season started this weekend. A bluebird day and spring conditions at Palisades!
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@StephenQuake
Stephen Quake
10 months
Virtual cell models have the potential to transform biological research. Today @ChanZuckerberg released an initial set of models, including scGenePT and SubCell, designed to be easy to run and build upon. This is a really exciting time in biology.
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chanzuckerberg.com
We’re making it easier for biologists and machine learning researchers to collaborate with cell models that are easy-to-use + build upon to accelerate the next big breakthrough.
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@StephenQuake
Stephen Quake
10 months
New @ScienceMagazine : #CZBiohubCHI's biosensor continuously measures proteins in vivo. In a diabetes model, it resets in under a minute, enabling real-time cytokine tracking. A breakthrough for inflammation-related diseases.
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czbiohub.org
Implantable device provides an impactful new way to monitor health and disease
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@StephenQuake
Stephen Quake
11 months
The convoluted language of cells is a ripe challenge for AI. With the extensive collection of biological data, the possibility of predictive models of cells and cell systems is on the horizon, and cell biologists will be key to bringing this to fruition.
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molbiolcell.org
The success of artificial intelligence (AI) algorithms in predicting protein structure and more recently, protein interactions, demonstrates the power and potential of machine learning and AI for...
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@StephenQuake
Stephen Quake
11 months
Had a great conversation with my student @sevahnv on the @myADLM podcast about work she led exploring cell-free RNA in urine as a path to avoid invasive biopsies for detecting diseases earlier in prostate, kidney and bladder tissues https://t.co/aJWweL26Eq
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@StephenQuake
Stephen Quake
11 months
Combining transcriptomic and metabolomic data from urine holds promise for improving early disease detection, subtyping, and prognosis, as well as enhancing our understanding of disease mechanisms. Read the paper in Clinical Chemistry:
lnkd.in
This link will take you to a page that’s not on LinkedIn
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@StephenQuake
Stephen Quake
11 months
In @CellCellPress, I share a major conceptual challenge for biology in the next decade, inspired by Crick’s Central Dogma: understanding information flow in the cell, the smallest indivisible unit of life https://t.co/dgvi6mMq1a
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@StephenQuake
Stephen Quake
11 months
Manual annotation of cryoET data is a major bottleneck in biomed research. The #CZImagingInstitute Kaggle Challenge seeks #AIML innovators to automate particle detection in 3D cell images. Share with ML/AI experts:
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kaggle.com
Find small biological structures in large 3D volumes
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@ChanZuckerberg
Chan Zuckerberg Initiative
1 year
Supporting diversity in science is key to advancing research. Our Science Diversity Leadership Award provides funding for researchers driving equity in biomedical fields. Learn more and apply: https://t.co/2bE1qbsfIG
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