Rachel Gleyzer
@RachelGleyzer
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Cancer Biology PhD Candidate in the Newman Lab @AaronNewmanLab @stanfordcbio @StanfordMed | NSF GRFP | @UChicago Class of 2020
Joined May 2021
Excited to have contributed to CytoTRACE 2! This work improves reconstruction of single-cell developmental potential and deepens our understanding of cell differentiation. Grateful to be part of this incredible team.
[1/10] We’re excited to introduce CytoTRACE 2 — a major upgrade for inferring developmental potential from single-cell RNA-seq across datasets. @naturemethods Led by @kang_minji_ in @AaronNewmanLab. 📄 Paper: https://t.co/UgfI8tWeep 🔗 Shareable link:
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Our community mourns the loss of Charles “Chuck” Kwok Fai Chan, PhD, professor of surgery. Chan, a stem cell researcher who discovered how to regrow cartilage, will be remembered for his generous spirit as a mentor and colleague.
med.stanford.edu
The Stanford Medicine researcher was known for his groundbreaking work and his generous spirit as a mentor and colleague.
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Excited to share CytoTRACE 2 with the twitter community and thrilled to have contributed to this work.
How to trace developmental potential on an absolute scale from single cell expression data? We are thrilled to announce that CytoTRACE 2 is out on bioRxiv! @AaronNewmanLab
https://t.co/Gsc7baJS6A
https://t.co/E06UMDFIRs
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Lot's of fun on the Newman Lab hike this weekend! @AaronNewmanLab @Wubing44589261 @kang_minji_ @JJAlmagro @xikun_zhang_
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Thanks for the invitation to speak @sitcancer @theNCI Looking forward to this!
Join #SITC and @theNCI for the first of 8 FREE webinars on June 28 in our Comp IO series: Facilitating Discovery of New Resistance Mechanisms with Data Visualization. Featuring @AaronNewmanLab of @StanfordMed & @CarstenKriegPhD of @MedUnivSC Register: https://t.co/pfGoYkJ5WE
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Congratulations to the CytoSPACE team, so happy to be a part of the awesome @AaronNewmanLab!
@CellStanford @Stanford @Oslounivsykehus @StanfordCancer @AaronNewmanLab @ChloeBSteen Researchers invent a tool to create high-resolution maps of gene activity, opening a path to improved diagnostics and therapies #NBTintheNews via @StanfordMed
https://t.co/mVxUEAstai
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Excited to announce our new method #CytoSPACE for mapping single cells from a reference atlas to #SpatialTranscriptomics (ST) data at high resolution, out now in @NatureBiotech! 1/10 https://t.co/nAcWwmfn79
nature.com
Nature Biotechnology - CytoSPACE maps individual cells from a reference single-cell RNA sequencing atlas to spatial transcriptomics data.
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Very honored to see that #CIBERSORT is among the 5 fastest-growing software tools in the biosciences. Thanks @cziscience for developing this resource and @Nature for publicizing it. It's been a privilege contributing tools to the scientific community! https://t.co/VyMmkzHdJU
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Thrilled to share another application of CytoTRACE in human cancer: We find a less differentiated population of breast cancer cells that preferentially integrate into vessels and metastasize via the LMO2-STAT3 signaling axis. See thread by @ssikandar.
science.org
LMO2 modulates STAT3 signaling to promote breast cancer metastasis.
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So amazing to see the Stanford community come together to celebrate @CarolynBertozzi's Nobel Prize. Congratulations!
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I'm thrilled to announce that I have officially joined the Newman lab for my PhD thesis research @AaronNewmanLab @StanfordMed @StanfordDBDS. Excited to work with a great team and develop novel methods for sequencing data analysis.
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How to efficiently study spatial transcriptomics data at single cell resolution? We are proud to introduce CytoSPACE, a new tool for fast and robust mapping of single cells to spatial transcriptomes, now on bioRxiv https://t.co/KsJ1lB2E9p
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shout out to @kristenfrombach and Hudson for leading journal club outside today! 🌞😎🌞😎
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