The NDEx Project
@NDExProject
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Developed @UCSanDiego, NDEx is an open source software infrastructure to store, share and publish biological network knowledge
La Jolla, CA
Joined September 2015
We did it! .Cytoscape Web v1.0 is live! .Try it here: Publication: Manual: #BiomedicalResearch #SystemsBiology.
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NDEx v2.5.8 is out. Still working with the @news4go team to include their GO-CAMs in IQuery. And the @cytoscape Web beta is coming soon! .Stay tuned for the official announcement. #networkbiology #nciitcr @CancerCellMap @CancerSysBio @ucsdccbb.
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RT @ElizSMcKenna: Now online in @CD_AACR: Cancer Mutations Converge on a Collection of Protein Assemblies to Predict Resistance to Replicat….
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RT @emblebi: Looking for a new way to measure impact metrics for your database?. Introducing MBDBMetrics; an online tool designed to measur….
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RT @Nature: In a world first, the UK medicines regulator has approved a therapy that uses CRISPR gene editing as a treatment for diseases h….
nature.com
Nature - The landmark decision could transform the treatment of sickle-cell disease and β-thalassaemia — but the technology is expensive.
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RT @Bioconductor: **We are moving platforms**. Bioconductor will cease posting on Twitter/X as of December 17, 2023. Instead we will be con….
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RT @uniprot: Interested in programmatic access to the UniProt database using Python - protein entry searches, data filtering, batch downlo….
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RT @ProfMilenkovic: Our review+perspective paper on "Current and future directions in network biology" is online (.….
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Our preprint is out!.Learn how #LLMs can help you discover gene set function: #nciitcr #networkbiology @cytoscape @CancerCellMap @NCIsysbio @UCSanDiego @BCMFromtheLabs.
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RT @conzept__: Improved the @NDExProject linking. Now linked via the @HGNC gene symbol, instead of the name. The range of #protein path….
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Curious about the current status of @NDExProject ? Wondering how to use our infrastructure or collaborate with us? .Find out in our latest video presentation crafted for #ismbeccb2023 !. @cytoscape @ucsdccbb @CancerCellMap #NCIITCR.
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RT @eportacangen: Super excited to share with you the results of the CPTAC PanCancer Driver project, today officially out at @cellcellpress….
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RT @StevenXGe: Top 50 most popular tools for pathway analysis. 1. Overrepresentation analysis (ORA) using a gene list.2. Functional class….
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RT @cosybio_UHH: #DrugstOne: Turn your #Bioinformatics tool into a powerful, interactive #DrugRrepurposing 💊 webtool in <15mins with 3 line….
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RT @dkNET_Info: The deadline was extended - so students, don’t wait!.The dkNET Summer of Data Student Program applications are due May 8, 2….
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RT @sigpathproject: Ever seen ads for #taltz on TV and wondered what its MOA is in resolving psoriasis? Wonder no more - collaborating with….
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RT @chrismungall: We have released version 0.3.0 of the #OntologyAccessKit #oaklib Includes preliminary compatibi….
github.com
Highlights compatible with sqlalchemy-2.x #463 upgraded to latest bioregistry #468 preliminary CX and NDExBio interoperation. #479 new option: extract #464 support for treating relationship type o...
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RT @news4go: Can't recommend this free 2-day #GeneOntology workshop enough!! If you can get to Rome the week after #biocuration2023, sign u….
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RT @dexterpratt: I'm hiring for a position in the software development team at the Ideker Lab, UC San Diego. The position is closely integr….
employment.ucsd.edu
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