Gene Ontology @[email protected]
@news4go
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The Gene Ontology project provides a controlled vocabulary to describe gene and gene product attributes in any organism. Not active on Twitter, check 🦋 & 🐘
Joined January 2009
This is a great intro 🧵! And for this question: GO uses annotation extensions, an additional field connected to the GO term with a contextual relation like "occurs in". This allows context to be added like tying a MF to a particular CC! If you use GO don't forget the extensions.
now, take protein moonlighting: a single protein can have multiple, seemingly unrelated functions depending on its cellular context. How do we capture this in GO without losing the nuance?
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During #metagenomics #bioinformatics at @MGnifyDB, you will learn about: • Different metagenomic data • Assembly & metagenome-assembled genomes • Data analysis • Data standards & submission • Metagenomic data analysis workflows Apply by 9 June: https://t.co/XoYisrXIPW
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Jurg Bahler is looking for a Postdoc on long-term Wellcome funding to investigate the roles of conserved yet unknown genes during cellular quiescence and ageing using fission yeast and turquoise killifish as model systems. https://t.co/oFR9xwU8j5
ucl.ac.uk
UCL is consistently ranked as one of the top ten universities in the world (QS World University Rankings 2010-2022) and is No.2 in the UK for research power (Research Excellence Framework 2021).
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Forgot to register for Quest for Orthologs 2024?Registration AND abstract submission dates have been extended to May 14!! Act now and join QFO8 in Montreal this July 17-18, right after @iscb's ISMB: https://t.co/5WwrlgX9bn
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Don't be the weak link! If you link to GO terms, GO_REFs, GO-CAMs, or the ontology, make sure you're using #PURLs. Read more: https://t.co/1UjoERItDq
#GeneOntology
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❤️ this. One of the monumental efforts in virology & microbiology education/trainings. @GHatfull & team SEA-PHAGES and SEA-GENES: Advancing Virology and Science Education | Annual Reviews
annualreviews.org
Research opportunities for undergraduate students are strongly advantageous, but implementation at a large scale presents numerous challenges. The enormous diversity of the bacteriophage population...
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Best way to celebrate #itsgonnabemay? A bonus GO release to wrap up April! Details for the second April release (2024-04-24): https://t.co/rUpE9Er1nh
#GeneOntology
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Holy Pathways, Batman! Did you know you can find GO-powered Pathways on @alliancegenome pages? https://t.co/p89GRNxKCw
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Meet #GEMLI: A powerful tool from Lausanne's Institute of Bioengineering for robust cell lineage identification from scRNA-seq dataset. Quick Read: https://t.co/g13aRLJAEZ
#Bioinformatics #CellLineages #scRNAseq #GeneExpression #GeneOntology #CancerResearch #sciencenews
cbirt.net
GEMLI (Gene Expression Memory-based Lineage Inference) is a computational tool for robust lineage inference from scRNA-seq datasets.
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Which biological domains are most associated with the risk of #Alzheimers? Researchers at Sage create risk scores across domains & drill down into the most significantly associated sets of gene ontology terms & annotated genes for potential therapeutics:
alz-journals.onlinelibrary.wiley.com
INTRODUCTION Alzheimer's disease (AD) is the predominant dementia globally, with heterogeneous presentation and penetrance of clinical symptoms, variable presence of mixed pathologies, potential...
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Happy #DNADay2024! Today's @alliancegenome forum post highlights some of the close ties between the Human Genome Project and the #GeneOntology: both Dr. David Botstein and Dr. Paul Thomas. https://t.co/0a2kiNPKx0
@KeckMedicineUSC
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New in #GeneGroups! Have you wanted a one-stop resource to find Drosophila genes involved in transmembrane transport? We've compiled the Transmembrane Transporter Collection. TRANSMEMBRANE TRANSPORTERS https://t.co/C3AFJkpO8Q was assembled from multiple sources, including
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Rice, wheat, bamboo, maize... the Poaceae family is immense. Read the new @NatureComms publication that looks at WGD in the massive grass family: #wholegenomeduplication
https://t.co/G4zel89Gek
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Calling all scientists who study #genetics and #genomics – you’re familiar with resources like databases, knowledgebases, and stock centers, including @news4go. Support the funding and growth of these resources by citing them in-text your next paper! https://t.co/faDyLfjMeW
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Ever try to look up a term in AmiGO, but the results included extra terms? That's a feature not a 🐞! Read about how we use closures to show you ontology search results- and how you can restrict this if needed #ontology
https://t.co/HEWBClv1bR
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Try out the new TAIR on https://t.co/UyZNJTiULn. During the testing period, please report bugs or send any feedback to curator@arabidopsis.org. The new site will go live in the next month. #plantscience #arabidopsis
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New GO release! 2024-04-18 is available now! https://t.co/Jp3rOt0GSu
https://t.co/cBQk0qe14N 10.5281/zenodo.10999780 42,271 GO terms 7,668,043 annotations 1,536,109 gene products 5,404 species More info & release notes: https://t.co/u9MW5aICSp
#newdata
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In addition to citing these references, GO asks users/tool devs/etc. to include the GO Release. Does GO really change that much?... Yes! https://t.co/9HOypBNHqn
If you use GO at any point in your project, we ask you cite our original paper and the most recent update: ➡️ https://t.co/HVce91fOaq ➡️ https://t.co/au5es53Afm Full citation policy at
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If you use GO at any point in your project, we ask you cite our original paper and the most recent update: ➡️ https://t.co/HVce91fOaq ➡️ https://t.co/au5es53Afm Full citation policy at
geneontology.org
GO citation policy and license
Citation of your beloved resources has never been more critical. We are evaluated on usage and citation, but citation rates are relatively low.
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Today's paper highlight: new @SciReports that uses #GeneOntology and could help advance research on liver cancer #CancerResearch
https://t.co/J78mDCo1l6
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