Steven Ge
@StevenXGe
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Professor, Founder of Orditus. Developer of https://t.co/7uS9mKC5KD, https://t.co/XW7sGGMcST, ShinyGO & iDEP . Topics: AI, stats, genomics, bioinformatics
Brookings, SD
Joined July 2011
Excited to launch DataMap – a portable, browser-based tool for generating heatmaps and PCA & tSNE plots. No installs. No servers. Your data never leaves your device. ✔️ Interactive heatmaps, PCA, and t-SNE ✔️ Transform & normalize data on the fly ✔️ Upload CSV, TSV, Excel +
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LangChain has led the way. But now the Claude Agent SDK adds a powerful new option. It gives developers the same capabilities used in the Claude Code app — including support for Claude Skills, tools, and MCP servers. You get file access, tool use, and strong context management
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⚠️Childrens doctor: 'The most severe Flu outbreak I've experienced'. Mutant H3N2 (subclade K) is sweeping the northern hemisphere, causing hospitals to be overwhelmed from China to Japan, from Spain to Uk. America and Canada are starting to spike. Multiple mask mandates,
Northern Ireland: Children hardest hit as flu cases soar Childrens doctor: 'The most severe [outbreak] I've experienced' Belfast Live https://t.co/8apl4KA1Jj
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🚨 NEW: One of the largest COVID-19 vaccine studies ever (28 MILLION people in France) just dropped. Results? • 74% lower risk of death from severe COVID-19 • 25% lower risk of all-cause mortality • No increase in 4-year mortality • Vaccinated people had lower risk of death
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The ultimate cloud for AI innovators. Built to democratize AI infrastructure and empower builders everywhere
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PSA: Install and run Claude Code locally on your laptop! It’s not just for coding—it's a full-fledged AI agent running on your own machine, helping you automate an incredibly wide range of tasks. The desktop Claude app now includes Claude Code, but I personally prefer running it
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Top-ranked AI coding assistants: Cursor, Claude Code, OpenCode, Codex. See the video from 2 months ago: https://t.co/7Yz3COJ8qX
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Does your research question fail the 'So What?' test? Your RQ needs 4 traits to survive: 1. Significance (Fill a gap) 2. Clarity (Focus deep) 3. Feasibility (Don't boil the ocean) 4. Structure (Ask "How," not "Yes") If the spine is soft, the project crumbles.
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What if your money could do more than grow? Robin John’s new book shows you how your investments can honor God and serve your neighbor. Join the Good Investor Movement and start investing with purpose!
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Build AI agents for science by linking Gemini 3 @GeminiApp with ToolUniverse @ScientistTools
🚀 Gemini 3 is powerful! But context limits are a challenge! e.g., Gemini CLI supports max 500 tools, while ToolUniverse provides 750+ scientific tools. We built Compact Mode to solve this: expose only 5 core discovery tools (list_tools, grep_tools, get_tool_info, execute_tool,
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I recently discovered the tidyplots package in R, and it’s impressive how effortlessly it enables you to create beautiful, publication-ready plots. Designed with scientific papers in mind, tidyplots lets you build, adjust, and refine plot components gradually, all with a
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Holy shit. I’ve used ChatGPT every day for 3 years. Just spent 2 hours on Gemini 3. I’m not going back. The leap is insane — reasoning, speed, images, video… everything is sharper and faster. It feels like the world just changed, again. ❤️ 🤖
wsj.com
Gemini 3’s surge past ChatGPT and other competitors on benchmark tests has handed Google an elusive victory.
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MCP servers, Claude Skill, sub-agents ... oh my! Think of it like running a construction company: 🔹 Claude Projects — Your building sites Each project is its own jobsite with blueprints posted, materials staged, and a dedicated crew ready to work. 🔹 Claude Code — Your on-site
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Ready to upgrade your team’s look? Design and order custom hockey jerseys fast. Upload your logo, pick your colors, and preview your design instantly. Built for beer leagues, made like the pros. 🏒
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I learned a lot from this Anthropic video on prompt engineering. 1. Prompt structure: a) 1–2 sentences to establish role and the high-level task description, b) main content, c) detailed instructions, d) examples, and e) repeat critical instructions, especially for long
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Claude scientific skills 🧬🖥️🧪 https://t.co/F3rvaYGFRa 🧬 Bioinformatics & Genomics 🧪 Cheminformatics & Drug Discovery 🔬 Proteomics & Mass Spectrometry 🤖 Machine Learning & AI 🔮 Materials Science & Chemistry 📊 Data Analysis & Visualization
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Claude Code is great, but I hit the usage limit by noon, in the middle of fixing a bug! I wasn't using it heavily.
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This is my R development setup — built on VS Code and running both Claude Code and OpenAI’s Codex inside a Docker container. It also supports Shiny apps and has been working great for me. I am on Windows. Running in containers seems better, since these coding agents were
github.com
Vibe coding via Claude Code & Codex. Contribute to gexijin/vibe development by creating an account on GitHub.
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I will be teaching a class on vibe coding Shiny apps in Feb 2026.
Just launched: our Developing Shiny Apps with AI course! 🚀 Learn to build interactive web apps using R, Shiny & powerful AI tools. Level up your coding game with @StevenXGe from 9–13 Feb 2026 https://t.co/RD0kGNHIzL
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This is my R development setup — built on VS Code and running both Claude Code and OpenAI’s Codex inside a Docker container. It also supports Shiny apps and has been working great for me. I am on Windows. Running in containers seems better, since these coding agents were
github.com
Vibe coding via Claude Code & Codex. Contribute to gexijin/vibe development by creating an account on GitHub.
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Christmas gifts for your science enthused friends and family. Many of the items offer special discounts of up to 40%! But hurry — these discounts only last through December 15, 2025.
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There are no more excuses for bad writing in 2025. Even Copilot in Microsoft Word is quite handy. I asked it to review my content first to see if I missed any topics, and it did a nice job. Then asked to proofread and find typos. Finally, it generated a clean Word file with all
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Thrilled see our paper out in @Nature ! 🤩 Wonderful collaboration with @GoCasteloBranco. Kudos to my amazing postdoc @Di_0579 at @YaleEngineering and Leslie Kirby from Goncalo's lab @karolinskainst. Huge team science with @YaleMed @UCSF @ASTARsg
https://t.co/IF7XbnS1q0
nature.com
Nature - A tri-omic atlas of the mouse brain from postnatal day 0 to P21 reveals that layer-specific projection neurons have a role in coordinating axonogenesis and myelination.
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New in iDEP: label your k-means clusters with enriched pathways—just a few clicks. Try it on your RNA-seq data today: https://t.co/n7uemh7fLw
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