lanlabUNSW
@LanlabUnsw
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Evolutionary Microbiology Lab at UNSW Sydney. Led by Professor Ruiting Lan.
BABS, UNSW Sydney, Australia
Joined October 2021
RT @amandaunsw: Just published👍I’m glad to share: Genomic evidence of two-staged transmission of the early seventh cholera pandemic | Natur….
nature.com
Nature Communications - The seventh cholera pandemic spread across the globe in three waves from 1961. Here, the authors sequence 22 genomes from 1961 to 1979 and show that the first wave of the...
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New research from our talented PhD student Samitha! Genomic diversity of Salmonella Typhimurium isolates from meat chicken processing plants in NSW, Australia. #genomics #poultry #salmonella
frontiersin.org
Contamination of poultry products by Salmonella enterica serovar Typhimurium (STm) is a major cause of foodborne infections and outbreaks. This study aimed t...
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RT @LijuanAda: Emergence of Poultry-Associated Human Salmonella enterica Serovar Abortusovis Infections, New South Wales, Australia https:/….
pubmed.ncbi.nlm.nih.gov
Salmonella enterica serovar Abortusovis is a ovine-adapted pathogen that causes spontaneous abortion. Salmonella Abortusovis was reported in poultry in 2009 and has since been reported in human...
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RT @medrxivpreprint: DODGE: Automated point source bacterial outbreak detection using cumulative long term genomic surveillance. https://t….
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RT @LaurenceLuu: Congrats @hirokisuyama1 on your first publication in @FrontMicrobiol . @LanlabUnsw #whoopingcough #proteomics #metabolicmo….
frontiersin.org
Pertussis, commonly known as whooping cough is a severe respiratory disease caused by the bacterium, Bordetella pertussis. Despite widespread vaccination, pe...
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These findings were made possible by a carefully designed scheme that reflects the underlying B. pertussis phylogeny as closely as possible. The database at is publicly available and automatically processes new illumina WGS submissions to NCBI. 6/6
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The highest resolution level (MGT5) of the MGT was able to describe very fine scale epidemiology. STs at this level describe B. pertussis isolates that are isolated at almost the same time and place. 5/6
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The B. pertussis MGT was also able to describe types that are deficient in the vaccine antigen pertactin. The causes of these deficiencies were also different between types. 4/6
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Three previously described macrolide resistant B. pertussis lineages from China were named with stable MGT types to facilitate ongoing global surveillance. 3/6
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We developed and applied a stable genomic nomenclature using multilevel genome typing (MGT) for Bordetella pertussis and were able to describe differences in MGT level 3 (MGT3) type between French and US isolates over time. 2/6
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New paper from @LanlabUnsw, in @EMI_Journal We described the global genomic epidemiology and evolution of B. #pertussis with >6500 isolates using MGT. @mjohnpayne @AliceZhengXu @compbiosan @sophie_octavia Public database -> 1/6
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RT @biorxiv_micrbio: Genomic epidemiology and multilevel genome typing of Bordetella pertussis #biorxiv_micrbio.
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RT @biorxivpreprint: Genomic epidemiology and multilevel genome typing of Bordetella pertussis #bioRxiv.
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RT @mjohnpayne: New preprint from @LanlabUNSW! We describe large and small scale trends in global #Bordetella #pert….
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RT @LaurenceLuu: Incredibly proud of @hirokisuyama1 who gave an outstanding PhD exit seminar last week. Wish I could have attended in perso….
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RT @JournalSpectrum: Check out the collaborative work of @lanlabUNSW, Westmead hospital, and Queensland Health about #genomic epidemiology….
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RT @amandaunsw: My latest research on Genomic Epidemiology of Vibrio cholerae O139 is published on Emerging Infectious Diseases journal. Th….
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RT @KateGQuinlan: Had a great time at the @UNSWBABS Panel Discussion – ‘Beyond a Bachelor Degree’ for @UNSW Open Day today. It was fun to….
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RT @LaurenceLuu: Join us on 19th July at 12:30 p.m AEST for two exciting talks hosted by @UTS_Science @AIMI_UTS. @sunnyz_wu will present hi….
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RT @mjohnpayne: Thank you to @AUSSOCMIC for the ECR poster prize at #2022ASM. What a great meeting! Looking forward to next year! Congrats….
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