Fairlie Reese / @fairlie.bsky.social
@FairlieReese
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Bioinformatics postdoc at the Barcelona Supercomputing Center. Audiophile, cat-lover, nerd. she/her
Barcelona
Joined December 2011
1/ Hi all! I am very excited to at long last share our work on the ENCODE4 long-read RNA-seq dataset: I'll highlight a few of our key findings below.
biorxiv.org
The majority of mammalian genes encode multiple transcript isoforms that result from differential promoter use, changes in exonic splicing, and alternative 3’ end choice. Detecting and quantifying...
I am so excited to finally share the bioRxiv version of our manuscript on investigating transcript structure diversity in the @ENCODE_NIH long-read RNA-seq dataset: Tweet thread coming tomorrow!.
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I’m so excited to share the work I’ve been part of from the first year of my postdoc at the @mele_lab. We analyze a long-read RNA-seq dataset derived from genetically-diverse samples. To see what we found please read the thread 😁
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RT @mele_lab: 📢NEW PREPRINT ALERT.Thrilled to share our latest work “Single-cell atlas of the human immune system reveals sex-specific dyna….
biorxiv.org
Immunosenescence, the gradual deterioration of the immune system with age, leads to an increased susceptibility to a range of diseases associated with immune dysfunction. Notably, sex is an important...
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RT @swaruplab1: Congratulations to my graduate student, Ze, for presenting their exciting research to a packed audience of over 500 at #ASH….
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RT @razoralign: BigSur: Statistically principled feature selection for single cell transcriptomics .
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RT @ItaiYanai: Doing good science is 90% finding a science buddy to constantly talk to about the project.
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RT @RamirezJMiguel: So happy for winning the best presentation award at the #ESCS2024 @iscb_escs and thankful for the networking and intere….
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RT @ZeTristanShi: Excited to share our paper on multiomic changes in PiD & AD! We uncover cell-type & disease-specific CREs and predict TF….
biorxiv.org
The study of neurodegenerative diseases, particularly tauopathies like Pick’s disease (PiD) and Alzheimer’s disease (AD), offers insights into the underlying regulatory mechanisms. By investigating...
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RT @smudgetendo: Happy to see our comparative study using scATAC + scRNA to study Pick's and Alzheimer's disease out in the world 😍. Was gr….
biorxiv.org
The study of neurodegenerative diseases, particularly tauopathies like Pick’s disease (PiD) and Alzheimer’s disease (AD), offers insights into the underlying regulatory mechanisms. By investigating...
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RT @yang_i_li: Excited to share our work on alternative splicing (AS). This version, compared to the biorXiv one, i….
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RT @marta_mele_m: Postdoctoral position open in Barcelona!! The @mele_lab is looking for computational biologists interested in large-scal….
bsc.es
Transcriptomics and Functional Genomics Lab (TFGL)
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RT @CellGenomics: The landscape of expression and alternative splicing variation across human traits.Top-read @Cell….
cell.com
García-Pérez et al. perform a multi-tissue analysis of the association between demographic and clinical traits and human transcriptome variation. Ancestry, sex, age, and BMI and certain diseases make...
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RT @marta_mele_m: Thrilled to be officially tenured!! 🙌🙌🙌.A huge thanks to the amazing present and past members of the @mele_lab as well as….
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RT @anaconesa: I´m thrilled to see our #LRGASP paper published in @naturemethods today. This is the work of many to benchmark long-read met….
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At long last the #LRGASP project has been published (! I'm thankful for the amazing group of people I've gotten to work with and learn from during this project, and hope y'all are proud of this great work.
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RT @naturemethods: We are excited to publish our second-ever Registered Report! The #LRGASP Consortium evaluated various methods for transc….
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RT @emblebi: DNA and RNA sequencing methods are rapidly evolving, each with its own benefits and challenges. Find out how the Long-read RN….
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RT @GencodeGenes: Out today: the Long-read RNA-Seq Genome Annotation Assessment Project (LRGASP) paper, featuring contributions from many G….
nature.com
Nature Methods - This Registered Report presents the results of the Long-read RNA-Seq Genome Annotation Assessment Project, which is a community effort for benchmarking long-read methods for...
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