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AI-driven Optical Biology Lab Profile
AI-driven Optical Biology Lab

@AIOpticalBioLab

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Research group lead by @HenriquesLab at @ITQBNOVA Combining #AI with #superresolutionimaging to push the boundaries of optical cell biology #SMLM #SRRF

ITQB NOVA, Lisbon, Portugal
Joined October 2024
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@AIOpticalBioLab
AI-driven Optical Biology Lab
14 days
Just in time for the presentation of his PhD work at the ๐Ÿญ๐Ÿฑ๐˜๐—ต ๐—œ๐—ง๐—ค๐—• ๐—ก๐—ข๐—ฉ๐—” ๐—ฃ๐—ต๐—— ๐— ๐—ฒ๐—ฒ๐˜๐—ถ๐—ป๐—ด, our researcher @Antonio_DBritoโ€™s paper on #mAIcrobe๐Ÿฆ in collaboration with @Bruno_MSaraiva has just been released. ๐Ÿ‘‡Learn more about it in the post below.๐Ÿ‘‡
@HenriquesLab
Ricardo Henriques
16 days
๐Ÿฆ ๐Ÿ”ฌ๐Ÿค–๐Ÿง‘โ€๐Ÿ’ป #mAIcrobe interface preview, a platform for #DeepLearning enabled bacterial image-based phenotyping. Check it out ๐Ÿ’ป: https://t.co/Aq5Fw8V9si ๐Ÿ“„: https://t.co/HI96OJzCKi
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@AIOpticalBioLab
AI-driven Optical Biology Lab
22 days
๐Ÿค๐Ÿผ This event is made possible thanks to the support of @IzasaMedical by Palex and collaboration with Bacterial Imaging Cluster (BIC) and MostMicro at @itqbnova
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@AIOpticalBioLab
AI-driven Optical Biology Lab
22 days
๐—ช๐—ต๐—ฎ๐˜ ๐—ถ๐—ณ ๐˜๐—ต๐—ฒ ๐˜๐—ฒ๐—ฐ๐—ต๐—ป๐—ถ๐—พ๐˜‚๐—ฒ ๐˜๐—ต๐—ฎ๐˜ ๐—ฐ๐—ผ๐˜‚๐—น๐—ฑ ๐˜๐—ฟ๐—ฎ๐—ป๐˜€๐—ณ๐—ผ๐—ฟ๐—บ ๐˜†๐—ผ๐˜‚๐—ฟ ๐—ฟ๐—ฒ๐˜€๐—ฒ๐—ฎ๐—ฟ๐—ฐ๐—ต ๐—ถ๐˜€ ๐—ฎ๐—น๐—ฟ๐—ฒ๐—ฎ๐—ฑ๐˜† ๐˜„๐—ถ๐˜๐—ต๐—ถ๐—ป ๐˜†๐—ผ๐˜‚๐—ฟ ๐—ฟ๐—ฒ๐—ฎ๐—ฐ๐—ต?๐Ÿค” Join us for two immersive days of live demos, expert talks & workshops.๐Ÿ”ฌ ๐Ÿ“Register now at https://t.co/JXu91LwqbF
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@AIOpticalBioLab
AI-driven Optical Biology Lab
1 month
The ๐—˜๐˜‚๐—ฟ๐—ผ๐—ฝ๐—ฒ๐—ฎ๐—ป ๐—ฅ๐—ฒ๐˜€๐—ฒ๐—ฎ๐—ฟ๐—ฐ๐—ต๐—ฒ๐—ฟ๐˜€ ๐—ก๐—ถ๐—ด๐—ต๐˜ ๐—ข๐—ฒ๐—ถ๐—ฟ๐—ฎ๐˜€ ๐Ÿฎ๐Ÿฌ๐Ÿฎ๐Ÿฑ was the last outreach event at our lab with @ArisDaria,@gomez_mariscal,@_mariod and @jdamianmtz.๐Ÿ‘ฉโ€๐Ÿ”ฌ๐Ÿ‘ฉโ€๐Ÿ’ป Scientists from diverse fields showed the work being developed at @itqbnova. It was truly inspiring!๐Ÿคฉ
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@AIOpticalBioLab
AI-driven Optical Biology Lab
2 months
Last week, @_mariod & @PPortela_Raquel presented their ECRA-award collaboration project, ๐—œ๐—ป๐—ณ๐—ฒ๐—ฐ๐˜๐—ผ๐—™๐—ถ๐—ง๐—ง at the ๐—œ๐—ป๐˜๐—ฒ๐—ฟ๐—ป๐—ฎ๐˜๐—ถ๐—ผ๐—ป๐—ฎ๐—น ๐— ๐—ถ๐—ฐ๐—ฟ๐—ผ๐—ผ๐—ฟ๐—ด๐—ฎ๐—ป๐—ถ๐˜€๐—บ ๐——๐—ฎ๐˜†. The event happened in Oeiras at Santo Amaro Beach and was organized by @itqbnova & @OeirasValley
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@AIOpticalBioLab
AI-driven Optical Biology Lab
3 months
๐Ÿ‘Congratulating to researchers @ArisDaria & @_mariod for their post-graduation in the StartUp Research Program where they had to develop a startup project and present it to a panel of experts and venture capital reps.๐ŸŽฏ @itqbnova @NovaSBE @OeirasValley @NIMSB_NOVA @STABVIDA
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@AIOpticalBioLab
AI-driven Optical Biology Lab
3 months
๐Ÿ–๏ธ Summer at @itqbnova means Summer Science - summer's internship programme for undergraduates. Our lab welcomed one motivated student supervised by @_mariod. ๐Ÿ‘ฉโ€๐Ÿ”ฌStudents got to experience 27h of hands-on lab workย and a sailing baptism!โ›ต Read about it at: https://t.co/QJTI8rtdx7
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@HenriquesLab
Ricardo Henriques
4 months
๐ŸšจWe're soon opening 3 postdoctoral positions in #AIDrivenBiology. Seeking biologists (especially microbiology and infection biology), computer scientists, and microscopy developers. Ideal if you're eager to use or develop next-gen tech for cell biology. Get in touch (DM/email)
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@AIOpticalBioLab
AI-driven Optical Biology Lab
4 months
Last Friday we celebrated @itqbnova Day!๐ŸŽ‚๐Ÿฅ‚ In the ceremony, ๐—˜๐—–๐—ฅ๐—” ๐—ฝ๐—ฟ๐—ถ๐˜‡๐—ฒ was awarded to @_mariod & @PPortela_Raquel in recognition of their outstanding proposal: InfectoFITT.๐Ÿ… The award was presented by @OeirasValley Councillor @PedroPatacho & Verรณnica Amparo #Sarstedt
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@HenriquesLab
Ricardo Henriques
4 months
It's here! โœจ The #ExSRRF protocol paper is out ๐Ÿ˜. Full details for merging Expansion Microscopy with eSRRF analysis. From cells to tissue. A partnership with @PuellesVictor. Lead by Dominik Kylies and Hannah Heil + colleagues. #ExM #eSRRF โžก๏ธ Open link: https://t.co/CcY87MgEo0
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@AIOpticalBioLab
AI-driven Optical Biology Lab
4 months
๐ŸงพNew paper now on @NatureProtocols! ๐ŸŽ‰The #ExSRRF protocol gives you all details on how to merge Expansion Microscopy technique with #eSSRF analysis. Developed by Hannah Heil @HenriquesLab and Dominik Kylies @PuellesVictor ๐Ÿ”—:
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nature.com
Nature Protocols - The combination of expansion microscopy with enhanced super-resolution radial fluctuations analysis enhances the image resolution of a conventional microscope to 25 nm in...
@NatureProtocols
Nature Protocols
4 months
New Article! Expansion and fluctuations-enhanced microscopy for nanoscale molecular profiling of cells and tissues https://t.co/zZIHNFvfsv
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@AIOpticalBioLab
AI-driven Optical Biology Lab
4 months
Our researcher @afonsomendes92 & collaborator @christlet just published on @NatureComms. They developed a new analysis tool that automatically finds repeating patterns in structures in biological images without prior knowledge. Read it at: https://t.co/9iHRIljS82 @Bruno_MSaraiva
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nature.com
Nature Communications - Mendes and colleagues present SReD, an unsupervised tool that detects repetitive biological structures in microscopy images. It works across imaging modalities and reveals...
@HenriquesLab
Ricardo Henriques
4 months
๐Ÿ”ฌ๐Ÿ‘จโ€๐Ÿ’ป๐Ÿ“ฐ #SReD is out! Automated structural detection for #ImageJ & #FIJI, from nano to macro โœจ๐Ÿ˜. No training data, no bias - texture analysis with GPU acceleration!โšก๏ธ Brainchild of @afonsomendes92 and adventure w @christlet lab + friends. Check: https://t.co/bkP94oAr7M
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@AIOpticalBioLab
AI-driven Optical Biology Lab
5 months
New pre-print alert ๐Ÿšจโš ๏ธ @HenriquesLab just published a pre-print on framework to auto generate pre-prints from simple text. Interested to use it for your research? ๐Ÿ“ƒRead more about it at:
zenodo.org
Rxiv-Maker Rxiv-Maker is an automated LaTeX article generation system that transforms scientific writing from chaos to clarity. It converts Markdown manuscripts into publication-ready PDFs with...
@HenriquesLab
Ricardo Henriques
5 months
๐Ÿง‘โ€๐Ÿ”ฌ๐Ÿ“ฐ๐Ÿš€ #RxivMaker is here! A framework automating the creation of publication-ready scientific #preprints from simple Markdown. Goodbye manual formatting, and hello gorgeous manuscripts! An adventure with G. Jacquemet's lab ๐Ÿ“œ: https://t.co/JmPaI4cbYb ๐Ÿ‘จโ€๐Ÿ’ป: https://t.co/HJ6TV6GFGZ
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@AIOpticalBioLab
AI-driven Optical Biology Lab
5 months
In the past week we welcomed students from Escola Amรฉlia Rey Colaรงo at @itqbnova Researchers @ArisDaria & @_mariod demonstrated the principle expansion microscopy was originated from- Baby Diapers๐Ÿ‘ถ We have our lab doors open to young minds to show them how research can be fun!๐Ÿ‘ฉโ€๐Ÿ”ฌ
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@AIOpticalBioLab
AI-driven Optical Biology Lab
6 months
#OeirasValleyScienceFestival was a blast! With 22.000 participants, the energy was incredible. @HenriquesLab delivered an amazing talk and researchers @ArisDaria and @_Mariod were busy all day sharing the wonders of microscopy๐Ÿ”ฌwith diapers๐Ÿผ- Curious to know how they relate?๐Ÿค”๐Ÿ’ญ
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@AIOpticalBioLab
AI-driven Optical Biology Lab
6 months
This Sunday @OeirasValley Science Festival is happening! ๐Ÿ“…On the 25th of May at 10:50 @HenriquesLab will talk in a roundtable session about ๐—”I ๐—ถ๐—ป ๐—›๐—ฒ๐—ฎ๐—น๐˜๐—ต. ๐Ÿ‘ฉโ€๐Ÿ”ฌMeanwhile researchers @ArisDaria & @_mariod will be representing our lab at @itqbnova stand. ๐ŸซตCOME SEE US!
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@90segundosPT
90 Segundos de Ciรชncia
7 months
Pedro Matos Pereira do @itqbnova estรก a usar รณrgรฃos em chip para estudar como bactรฉrias resistentes a antibiรณticos interagem com as nossas cรฉlulas. https://t.co/bPkLxGoKhy #90SegundosCiรชncia
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@AIOpticalBioLab
AI-driven Optical Biology Lab
7 months
Over the school break, @m_g_ferreira & @_mariod engaged in an outreach activity under the scope of @OeirasValley project "Universidade de Primavera". Students became scientists for a day, observed their own cells and explored the new technology for bioplastics at @itqbnova.๐Ÿงซ๐Ÿ”ฌ
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@AIOpticalBioLab
AI-driven Optical Biology Lab
7 months
Following the release of @m_g_ferreira and @gomez_mariscal #ReScale4DL work, Estibaliz shared her view on "FAIR and high-quality AI-ready data for bioimage analysis" on the 4-part @AI4LifeTeam webinar series in collab with @GloBIAS_โœCatch the next one at https://t.co/xNWpvVJbtc
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