Bruno Saraiva
@Bruno_MSaraiva
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Postdoc researcher @HenriquesLab, IGC. Teaching machines pixel by pixel. Opinions are my own.
Oeiras, Portugal
Joined June 2016
Hey #Microscopy 🔬 Twitter! We have a new #preprint out 🚨🔥🚨 #NanoPyx is a #Python 🐍 bioimage analysis framework that can dynamically exploit the hardware of YOUR computer to improve performance by over 10-fold! https://t.co/DxeHLad8J4
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And to start 2025 strong… Our work #NanoPyx is out in @naturemethods 😍❤️ DOI: https://t.co/ZjsQmT0qcf
#NanoPyx is a Python framework that uses the #LiquidEngine to efficiently accelerate bioimage analysis for any user! (1/n) ⬇️
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😍⚠️And it’s out in @J_Cell_Sci!! Our review on the opportunities and challenges of using Machine Learning in Microscopy research 🤖🔬! From using ML to curate data to using ML to give us more KNOWLEDGE about our data (i.e. Interpretation 😉) DOI: https://t.co/HmYiaHgfgX (1/n) ⬇️
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Waiting for pizza!! #I2K2024 @IvanHCenalmor @Bruno_MSaraiva @inesmcunha @biovoxxel @StRigaud @gomez_mariscal @VirginieUhlmann + others!
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My first #EMBO skeletal muscle meeting. Thank you for the invitation, what an awesome community and great science #Myotwitter @gomes @AnadaRosaSoares
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🚨 New paper alert! 🚨 I am thrilled to announce our latest work where we explored the link between myonuclear position and blood vessel organization during skeletal muscle postnatal development! Out now in @Dev_journal 📍 @gomes @ClaudioAFranco1 @GIMM_Institute
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🚀🚨 Help us shaping the future of #openmicroscopy! We're building the next-gen automated, customizable UC2 microscope & we need your input! 💬 Take our survey & get a chance to win the unreleased openUC2-Xiao🔬before it hits @seeedstudio!🎉 👉 https://t.co/QbNundHmui
#ProtoTypn
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Everyday is spline day, and today even more! We are releasing #SplineBox, a Python package for spline fitting 🐍 Fantastic collab with the @EPFL_Imaging Center building on my @emblebi work. Check it out, feedback welcome (love letters or angry e-mails): https://t.co/924OgiNDBn
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New preprint alert 🚨come check out how @afonsomendes92 is planning to shred #SReD your 🔬 images looking for repetitive structures 🔎
🚨🖥️🦠 OMG! #SReD is live and SHREDDING! Tap into the power of structural repetition to see new things! I'm clearly biased, but our method sure isn't! Let me show you what it can do 🧵👇 https://t.co/AsxAifx81Y
#opensource #microscopy #biology
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We are organizing with @giulia_paci and @MaKaefer the @The_CBIAS @napari_imaging Workshop 2024 at @TheCrick : 27-28 November 2024 Applications by: 15 September 2024 Introduction to conda environments, napari plugins, basic #bioimageanalysis with Jupyter Notebooks and napari
Want to learn how to use napari for bioimage analysis? We’re running a two-day training course for researchers with coding experience who want to learn the ins and outs of napari. 📅 27-28 November 📍 The Crick Apply now ⤵️ https://t.co/F7OnyLJWxP
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#SMLMS2024 want to try #PhotoFitt? Our entire framework is available on our GitHub including some datasets so you can start playing with it right away! @SMLM_Symposium
The entire quantitative framework is available at our #GitHub repository https://t.co/FyxN8NPGzi 👩💻all the data contributed within this project at the #bioarchive @emblebi repository 💾 https://t.co/eEdHgGbvCj
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@_mariod bringing #phototoxicity🧨 into discussion at #SMLMS2024 with #PhotoFiTT😎 and how to quantify it without labels!! read more about it 👇 https://t.co/y1PLDUzOoj
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Now @_mariod showcasing PhotoFiTT, a method to quantify phototoxicity in live-cell imaging 🔬 (the 🐘in the room)
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Now at #SMLMS2024, @Bruno_MSaraiva showcasing #NanoPyx !! 😍 How we can accelerate image analysis for everyone 💻🔬
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🌈 New chapter unfolding! Our team is set to join the brilliant minds at @itqbnova @NOVAunl soon. 🤖🔬 Combining #SuperResolution, #AI, and boundless curiosity to study cells-pathogens and enable novel #BioMedical research. Looking forward to building a future with our colleagues
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New preprint alert 🚨 We're thrilled to share our latest research that unravels the mysteries of t-tubule membrane growth in myofibers💪 https://t.co/5mK1lwMDXS Thread below ⬇️#scitwitter #CellBiology #myofiber #developmentbiology
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A while ago we embarked on the most exciting project with @gomez_mariscal at @HenriquesLab. Phototoxicity Fitness Time Trial or #PhotoFiTT assay is a label-free method to measure cellular behavior and detect phototoxic effects during live-cell imaging https://t.co/4KWETq3fgk
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🚨I’m thrilled🚀to announce that the most exciting and adventurous project together with @_mariod at @HenriquesLab 💜is finally out🔥#PhotoFiTT: A Quantitative Framework for Assessing Phototoxicity in Live-Cell Microscopy Experiments🔬⚡🧫💻 https://t.co/i3DqO0xflo
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Dear #scitwitter #ER lovers, is there any good ER dye? Bonus if it works on primary cultures :) 🙏
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