Paul Harrison @paulfharrison.bsky.social
@paulfharrison
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It is time to go. @paulfharrison.bsky.social @[email protected]
Monash University, Melbourne
Joined March 2014
Registrations for ResBaz Victoria 2024 at Monash University are now open. The program is quite varied, it's going to be an adventure! #resbaz #resbazvic2024.
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The Monash Genomics and Bioinformatics Platform did a bulk RNA-Seq workshop this week. I'm really pleased how it went. We were able to incorporate a lot of practical experience, and dig into the details of how to interpret QC reports and plots.
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RT @naturemethods: In this feature by @metricausa, @rafalab @jsb_ucla @hippopedoid @CellTypist and others share their views on PCA, t-SNE,….
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RT @torstenseemann: I am excited to win a CZI EOSS grant! This is the first grant I have ever won after 20+ years in science. It feels wond….
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RT @m_mohenska: @davisjmcc using GraphSAGE for spatial analyses, e.g. clustering based on cellular localisation. #WEHIspatial24 @WEHI_resea….
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I have, dangerously, recently encountered a few ideas about the theory of teaching. Please, please suggest related or contradicting ideas I've missed!.
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RT @GB13Faithless: @torstenseemann working the crowd & showing how to go from assembled genomes to clinically relevant resistomes, all with….
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RT @bioinfoedsummit: We start our second day at @bioinfoedsummit with discussions about the progress and current gaps to broaden current co….
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Job offering at Monash University: .Senior Lecturer in Bioinformatics.
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The most common sin of colored scatterplots is not (at least) plotting the points in random order. Plotly is worst at this! It draws one color at a time. (langevitour will randomize the order of your points, by the way. This is not an optional feature.).
We also looked at the MNIST (handwritten digits) data where there is a ground truth (the number). Here we found that t-SNE and UMAP can fool even just by the way the plots are colored! Also they scramble the points just as they do cells in #scRNAseq. Another failed control. 19/
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RT @shyam_lab: Spatial omics data analysts sometimes use the “log1p” (y=log[1+x’]) transform incorrectly. Key fact: x’ represents normalize….
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Job opening for Genomics Facility Manager, running the sequencing at the Central Clinical School, Monash, located at the Alfred.
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RT @const_ae: Incredibly proud to see our benchmark of single-cell preprocessing methods finally published 🥳🥳🎉. We show that despite its th….
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RT @NatureBiotech: Grand challenges in bioinformatics education and training . https://t.co/….
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RT @AusBiocommons: 🤔What #bioinformatics training would improve your research?.🔍What #training is missing in Australia?. As part of the Nat….
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RT @Bioconductor: **Are you thinking about joining Mastodon?!**. Here are five easy steps to get you started!! . Make sure to give us a fol….
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