Maciej Dobrzynski
@macdobry
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computational biologist | data scientist | biophysicist | modeller
Berne, Switzerland
Joined September 2010
Code an image classifier from scratch using numpy only. Watch the network train on a nano dataset. #MachineLearning #NeuralNetworks #tutorial #Python
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A step-by-step tutorial for detecting collective phenomena in time-lapse images in a new #OpenAccess article in Methods in Microscopy from @degruyter_brill @benigraedel @paoloarmando83 @PertzL,
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RT @BogovicJohn: @david_legland blows the minds of students and teachers alike. Do NOT measure a shape's perimeter by counting pixels! See….
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Our training at #EMBOBioImage @EMBLEvents Feels like I’ve stepped into NASA’s Mission Control. 🚀👩🚀 Expecting a countdown for Ctrl+Alt+Delete any moment now. 🤓
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Catching up with the pre-course material for the Advanced Bioimaging Analysis training in Heidelberg. Looking forward to networking and learning all the latest in #bioimageanalysis @EMBLEvents #EMBOBioImage
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A dream software/hardware stack for smart #microscopy developed by our fantastic PhD student @lhinderling.
What if you could talk to your microscope? Honoured to present our work @PertzL on real-time image processing and smart microscopy! Video shows @manager_micro control using #OmegaAgent by @loicaroyer
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Finally out! Quantify collective phenomena with our computational tool ARCOS.
.@paoloarmando83, @benigraedel et al. develop ARCOS, a method to detect & quantify collective signaling in cell collectives. Open-source and user-friendly, w/ R & Python packages, and a @napari_imaging plugin: @lhinderling @PascalEnder @PertzL @macdobry
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Great to see ARCOS ( applied to such a beautiful phenomenon 👍🏻.
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Fund a project that will democratize microfabrication by using cheap, off-the-shelf components .#crowdfunding #opensource #Science #technology.
How to 3D-print any microfluidic device or stamp for micropatterning? Quick iteration times, from design idea to seeding cells in one day, no clean room required. Short thread on a method we’re working on in the lab!
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RT @MBLScience: DL@MBL: Deep Learning for Microscopy Image Analysis (#DLatMBL). Course Dates: August 21 – September 5, 2023.Application Dea….
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Fantastic collaborative spirit at 2023 @NEUBIAS_ training and symposium. We need to create sustainable support for the amazing #bioimaging #opensource software and prevent the infamous code rot. Interesting to see @ChanZuckerberg financing so many projects. Thank you all!.
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Strong Swiss representation at @NEUBIAS_ symposium in Porto🇨🇭💪🏻 @SwissBIAS #ImageAnalysis #MachineLearning #DeepLearning
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RT @CiminiLab: Are you a grad student, postdoc, or early-career PI and passionate about teaching and learning #bioimageanalysis? So passion….
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