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Eugene Katrukha ๐Ÿ‡บ๐Ÿ‡ฆ Profile
Eugene Katrukha ๐Ÿ‡บ๐Ÿ‡ฆ

@katpyxa

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biophysics, cytoskeleton and self-disorganization

Utrecht, NL
Joined September 2008
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@katpyxa
Eugene Katrukha ๐Ÿ‡บ๐Ÿ‡ฆ
9 months
I decided to move to the 450nm atmospheric website, look for me there.
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@katpyxa
Eugene Katrukha ๐Ÿ‡บ๐Ÿ‡ฆ
9 months
RT @microtubule_guy: What is the difference between a growing and shortening microtubule end? I thought I knew the answer until I started tโ€ฆ.
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@katpyxa
Eugene Katrukha ๐Ÿ‡บ๐Ÿ‡ฆ
9 months
RT @CiminiLab: Have you ever analyzed a #microscope image before- even just a single one? Please take our survey on progress and places toโ€ฆ.
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@katpyxa
Eugene Katrukha ๐Ÿ‡บ๐Ÿ‡ฆ
9 months
RT @JCellBiol: .@yuhao_han, Grรผnewald, @MarinaMikhaylo8 @HumboldtUni et al. use primary hippocampal cultures to demonstrate that neurons wiโ€ฆ.
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@katpyxa
Eugene Katrukha ๐Ÿ‡บ๐Ÿ‡ฆ
9 months
RT @ctrueden: @christlet @ArrateMunoz @guijacquemet Pre-release bundles available at โ€“ still working on fixing a feโ€ฆ.
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@katpyxa
Eugene Katrukha ๐Ÿ‡บ๐Ÿ‡ฆ
9 months
RT @BoSoxBioBeth: Virtual I2K starts TOMORROW, Monday the 28th! 34 FREE sessions, 900+ registrants so far. Learn more about favorite #bioimโ€ฆ.
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@katpyxa
Eugene Katrukha ๐Ÿ‡บ๐Ÿ‡ฆ
9 months
Impressive talk about 'behind the scene' of full fly brain reconstruction from @sdorkenw #I2K2024
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@katpyxa
Eugene Katrukha ๐Ÿ‡บ๐Ÿ‡ฆ
9 months
RT @lhinderling: yes, i do public engagement (lost my poster in the train).
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@katpyxa
Eugene Katrukha ๐Ÿ‡บ๐Ÿ‡ฆ
9 months
RT @jn_hansen: How diverse is protein localization to human primary cilia? Check our study revealing incredible cell-type and single-cell dโ€ฆ.
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biorxiv.org
Primary cilia are solitary filamentous protrusions on most human cells. Our understanding of their function is informed by the study of ciliopathies, hereditary diseases linked to cilia dysfunction....
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@katpyxa
Eugene Katrukha ๐Ÿ‡บ๐Ÿ‡ฆ
9 months
RT @GoogleAI: Announcing CT Foundation, a new medical imaging embedding tool that accepts a computed tomography (CT) volume as input and reโ€ฆ.
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@katpyxa
Eugene Katrukha ๐Ÿ‡บ๐Ÿ‡ฆ
9 months
RT @GrosOane: Microscopy Nodes 2.0 is out! This includes a new channel interface and OME-Zarr support! ๐Ÿ”ฌ๐ŸŽ‰.
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@katpyxa
Eugene Katrukha ๐Ÿ‡บ๐Ÿ‡ฆ
9 months
RT @loicaroyer: ๐Ÿš€ Thrilled to announce #inTRACKtive: a web-based tool for exploring massive cell-tracking datasets, no software installatioโ€ฆ.
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@katpyxa
Eugene Katrukha ๐Ÿ‡บ๐Ÿ‡ฆ
9 months
RT @loicaroyer: 2/ ๐Ÿ  Zebrahub-Multiome offers interactive data exploration via CZ #CellxGene and interactive figures powered by #Streamlit.โ€ฆ.
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@katpyxa
Eugene Katrukha ๐Ÿ‡บ๐Ÿ‡ฆ
9 months
Very pretty! And looks like just right dataset for #BigTrace analysis and visualization.
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@katpyxa
Eugene Katrukha ๐Ÿ‡บ๐Ÿ‡ฆ
9 months
+ many new and improved old measurements. Check wiki For chat, stop by at poster #99 at I2K (N/N).
Tweet card summary image
github.com
FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets - ekatrukha/BigTrace
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@katpyxa
Eugene Katrukha ๐Ÿ‡บ๐Ÿ‡ฆ
9 months
Thanks to the imglib2-mesh, we can now extract just the volume inside ROI (before it was only the full bounding box) (3/N)
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@katpyxa
Eugene Katrukha ๐Ÿ‡บ๐Ÿ‡ฆ
9 months
It can also make "uncoil" animations [like this one (2/N)
@katpyxa
Eugene Katrukha ๐Ÿ‡บ๐Ÿ‡ฆ
11 months
How to uncoil a snake #BigTrace
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@katpyxa
Eugene Katrukha ๐Ÿ‡บ๐Ÿ‡ฆ
9 months
The new #BigTrace plugin version (0.5.0) is out. There is an animation panel now, supporting keyframes (1/N)
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@katpyxa
Eugene Katrukha ๐Ÿ‡บ๐Ÿ‡ฆ
10 months
RT @ManuelTHERY: Experiment of thought for the microtubule crowd. Behind is the question: by sequestering free tubulin, does nocodazole simโ€ฆ.
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@katpyxa
Eugene Katrukha ๐Ÿ‡บ๐Ÿ‡ฆ
10 months
RT @sketchscience: Wonderful news! Parafilm M rules! .Very well-deserved recognition after helping so many other #NobelPrize winners achievโ€ฆ.
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