Explore tweets tagged as #Bioconductor
Scafari: Exploring scDNA-seq data. #scRNAseq #Bioconductor #QC #VariantAnalysis #Visualization #Bioinformatics
https://t.co/lbtDVK5U3k
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Important milestone for me and my lab: fgsea has passed DESeq2 on the list of most downloaded Bioconductor packages. It started as a side project during my PhD, back when DESeq2 was already a staple of RNA-seq analysis. I never even thought it could go this far—but here we are!
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#ggkegg, an extension of #ggplot2 #R to visualize KEGG MODULE/PATHWAY https://t.co/bVxFSk8beW Compatible with bulk & scRNAseq & microbiome data Seiya Imoto lab Bioinformatics 2023 https://t.co/BnVxJQVKnA
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¿Ya estás usando Bioconductor 3.21 con R 4.5? 🚀 2341 paquetes, 72 nuevos, 30 workflows y mejoras para multi-ómicas y transcriptómica espacial. Compatible con Linux, Windows y macOS (Intel/ARM). 👉 https://t.co/KMpIfbBYnk
#RStats #Bioinformática
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doubletrouble: an R/Bioconductor package for the identification, classification, and analysis of gene and genome duplications https://t.co/3XUQ5yih4O
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cypress: an R/Bioconductor package for cell-type-specific differential expression analysis power assessment https://t.co/LKyaz1aM9d
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GeDi: Simplifying Gene Set Distances for Enhanced Omics Interpretation in R/Bioconductor https://t.co/E2zTwmYDc0
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With 📦 https://t.co/8gu4letvho you can install both CRAN and Bioconductor packages 🚀 #rstats #dataviz #phd
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🧹🧬💻Exciting first #tidyomics @Bioconductor meeting! We talked about community, development plans, and things to improve. Join us for the next one in two weeks. Details soon!
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UL researchers win European award for commitment to Open Science Professor Aedín Culhane and Dr Maria Doyle have won a Young European Research Universities Network (YERUN) Open Science Award 2023 for their work on the Bioconductor project https://t.co/cReNUGqtwq
#StudyatUL
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#EuroBioC2025 se celebra del 17 al 19 de septiembre en el PRBB de Barcelona @the_prbb. Paquetes, talleres Carpentry y redes colaborativas. Detalles y registro: https://t.co/fw8q6cSp4Q
@Bioconductor #Bioinformática #Bioconductor #Barcelona
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I gave a keynote at the European Bioconductor Conference @UniofOxford , here are the key takeaways! 1/n 🧵
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Pedixplorer: a Bioconductor package to streamline pedigree design and visualization. #PedigreeDesign #PedigreeVisualization #Bioconductor #Bioinformatics 🧬 🖥️ https://t.co/HibVDBT0O1
https://t.co/FLz7F63dZ8
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My absolute favorite session from day 1 of the #BioC2024 conference☺️🥂 “Inclusive internships in genomic data science” by @svetlana_up 💛 I am so elated to be a contributor to the #BugSigDB project for @Bioconductor 🤭
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大学院生の松澤さんの開発した、R Bioconductorパッケージ「tomoseqr」の論文が出版されました🎉 ３方向の直交軸での連続切片のRNA-seq（=Tomo-seq）から、 遺伝子発現の３次元空間分布を推定し、 推定結果の可視化や解析ができます！ https://t.co/A5jr6cPV59 （動画あり） 続
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*DifferentialRegulation* out in Biostatistics: https://t.co/dyWXV2QzwD A Bayesian hierarchical method to identify differences in splicing dynamics (i.e. gene regulation) between conditions. It works on bulk and single-cell RNA-seq. Also on Bioconductor: https://t.co/dJeOSWoQMr
DifferentialRegulation pre-print online -> https://t.co/aw76rc25Aj *DifferentialRegulation* studies how splicing dynamics change between experimental conditions. It is based on a Bayesian hierarchical method (multiple samples) with latent states (for multi-mapping reads).
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I'm thrilled to share our new #Bioconductor package, nipalsMCIA, which performs multi-omic dimensionality reduction using the NIPALS algorithm. It is fast (especially for large datasets), and user friendly. Give it a try! https://t.co/1wBpq016vQ (1/4)
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🧬 "SurfR: Riding the wave of RNA-Seq data with a comprehensive Bioconductor package to identify Surface Protein Coding Genes" introduces SurfR, an R package enabling streamlined analysis of surface protein genes from #RNASeq data. Read more: https://t.co/tVKOJMJOcK
#DataAnalysis
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