Chunlei Wu Profile
Chunlei Wu

@chunleiwu

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449
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494

Professor @scrippsresearch - Bioinformatics, Data science, Crowd-sourcing, Genomics - Building @biogps @mygeneinfo @myvariantinfo @biothingsapi

Joined August 2010
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@chunleiwu
Chunlei Wu
3 months
RT @NDExProject: We’re excited to be officially included in the #NIAID Data Ecosystem Discovery Portal, a hub for accessing #FAIRData from….
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@chunleiwu
Chunlei Wu
1 year
RT @JasonWilliamsNY: Ready to get started with #BOSC AT #ISMB2024 !
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@chunleiwu
Chunlei Wu
2 years
RT @scrippsresearch: Scripps Research scientists @flaneuseks @andrewsu @chunleiwu have partnered with @NIAIDBioIT to launch the NIAID Data….
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@chunleiwu
Chunlei Wu
2 years
Do you have a #UI for non-computational researchers? Q3 from the audiences:.It's still a tool for bioinformatician at its current stage, but web #UI is on our Todo list. Altly, Biomedical Translator project is building a dedicated UI for querying knowledge #API, including ours.
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@chunleiwu
Chunlei Wu
2 years
How scalable it is? Q2 from the audience:.BioThings Explorer does not hold any data locally, only keeps #MetaKG, semantic annotations of #API, in the memory, so scalability is one of its highlighted features.
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@chunleiwu
Chunlei Wu
2 years
How it's different from #RDF and #SPARQL approach, Q1 from the audience:.It separates data (as #API) & semantics (as annotations) into two steps, so they can evolve separately or even handled by different teams, e.g. only change semantic annotations when knowledge model changes.
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@chunleiwu
Chunlei Wu
2 years
Jackson from @biothingapi team presenting BioThings Explorer, as a way to integrate distributed knowledge #APIs with lower developer burden #BOSC2023 #ISMBECCB2023
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@chunleiwu
Chunlei Wu
2 years
RT @OBF_BOSC: Another great talk at #BOSC2023!.
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@chunleiwu
Chunlei Wu
2 years
RT @GigaScience: J Harry Caulfield now talking about transforming unstructured biomedical texts with LLMs. Using these to translate this un….
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@chunleiwu
Chunlei Wu
2 years
RT @deepakunni3: The first keynote for #BOSC2023 by Dr. Sara El-Gebali (@yalahowy) titled “A New Odyssey: Pioneering the future of scientif….
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@chunleiwu
Chunlei Wu
3 years
RT @biothingsapi: Now you can easily find sets of genes involved in #GeneOntology processes, diseases and more with our new @mygenesetinfo….
mygeneset.info
A website and API to collect, save, and share genes
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@chunleiwu
Chunlei Wu
3 years
Our latest #Biomedical #API member of the @biothingsapi family! Public annotated genesets➕ user submitted genesets➕anonymous genesets.
@mygenesetinfo
mygenesetinfo
3 years
Soft launch of our brand-new a web toolset for sharing functional gene sets in all species with programmatic #API access. A joint work of @vincerubinetti @ravila_4 & the @biothingsapi team of @GreeneScientist & @chunleiwu labs!.
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@chunleiwu
Chunlei Wu
3 years
RT @biothingsapi: New BioThings SDK #pypi package released with support for #python 3.9, 3.10 and a lot of other improvements! https://t.co….
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pypi.org
a toolkit for building high-performance data & knowledge APIs in biology
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@chunleiwu
Chunlei Wu
3 years
RT @NIHDataScience: NIH launched the Long COVID Computational Challenge (L3C) which will award up to $500k in support of data-driven AI/ML….
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@chunleiwu
Chunlei Wu
3 years
RT @DiseaseOutbreak: We collaborated with @gisaid to enable access to all genomic data on via R package https://t.c….
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@chunleiwu
Chunlei Wu
3 years
RT @ScrippsFaculty: Congrats @ScrippsGradPrgm @ScrippsResearch for being, once again, ranked among the top ten in the nation, according to….
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@chunleiwu
Chunlei Wu
4 years
RT @NIHDataScience: Just announced! @NIHdatascience is making it easier for researchers to share and reuse NIH-funded research data. Learn….
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@chunleiwu
Chunlei Wu
4 years
RT @andrewsu: Would love to see more candidates in bioinformatics and computational biology! @iscb.
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@chunleiwu
Chunlei Wu
4 years
RT @ncats_nih_gov: The LitCoin Natural Language Processing (#NLP) Challenge is live! NCATS will reward the most creative & high-impact uses….
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