BioThings API
@biothingsapi
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Making High Performance Data APIs in Biology. Provide an SDK to build APIs like @mygeneinfo @myvariantinfo
Joined April 2015
Now you can easily find sets of genes involved in #GeneOntology processes, diseases and more with our new @mygenesetinfo API. Try it out at
mygeneset.info
A website and API to collect, save, and share genes
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Soft launch of our brand-new https://t.co/Wi6ASuiddv, a web toolset for sharing functional gene sets in all species with programmatic #API access. A joint work of @vincerubinetti @ravila_4 & the @biothingsapi team of @GreeneScientist & @chunleiwu labs!
mygeneset.info
A website and API to collect, save, and share genes
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Our new SDK release comes with support for both #elasticsearch 7 and 8. Learn more here:
pypi.org
a toolkit for building high-performance data & knowledge APIs in biology
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New BioThings SDK #pypi package released with support for #python 3.9, 3.10 and a lot of other improvements!
pypi.org
a toolkit for building high-performance data & knowledge APIs in biology
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The @myvariantinfo talk will be the last talk of the Wednesday #BOSC2022 session on #DataAccess and #visualization
Interested in the latest developments with https://t.co/Aggr3Xwc6g? Our very own @YaoY87 will be giving a talk at #BOSC2022 / #ISMB2022 on Wednesday (Session 3a)
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We would like to thank the teams at @gisaid @cvisb @scrippsresearch @biothingsapi for making this possible, our funders @niaidnews @cdcgov @data2health, & the thousands of organizations & individuals around the world who share data to fight the pandemic.
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New #preprint on the @biothingsapi SDK to build your own RESTful APIs from the @chunleiwu and @andrewsu labs at @scrippsresearch.
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You can install the #python package using "pip install biothings"
pypi.org
a toolkit for building high-performance data & knowledge APIs in biology
APIs like ours play a big role in #FAIRdata and #OpenData. The BioThings SDK makes building such APIs easier. More about it in the new #preprint from the @biothingsapi team:
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The BioThings SDK has been used to build APIs like the ones used by @DiseaseOutbreak. Learn more about it from the new #preprint
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Want to build your own biomedical data API like @mygeneinfo? Read about the BioThings SDK in our new #preprint on #biorxiv_bioinfo. #FAIRdata
biorxiv.org
Summary To meet the increased need of making biomedical resources more accessible and reusable, Web APIs or web services have become a common way to disseminate knowledge sources. The BioThings APIs...
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The Data Discovery Engine and Schema Playground are natural extensions of the BioThings #bioinformatics tools ecosystem. Learn more about them from our new #preprint
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Hi @chunleiwu! I used https://t.co/oeLQXfFKTl API today. It's a super helpful tool, thanks for making it and for writing good instructions. I used it to grab Entrez # for a few hundred gene symbols. Went from "what's this tool?" to results in about 10 minutes. #Bioinformatics
mygene.info
Gene Annotation as a Service.
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@stromulus 🚀@stromulus that's awesome to hear! In case it's useful, our @biothings team made available other APIs like @myvariantinfo @mycheminfo @mydiseaseinfo too, in addition to @mygeneinfo :-)
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NEW #variant surveillance tool from @cvisb @scrippsresearch: Search by location to find #SARSCoV2 lineage & mutation prevalence in any country, state, or region at https://t.co/HI67HMHDG1
#COVID19 #opendata
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A new #SARS_CoV_2 mutation situation report feature is now available on https://t.co/Ihf0K67zHd. The tool is a collaborative effort by members of the labs of @K_G_Andersen @andrewsu & @chunleiwu at @scrippsresearch
https://t.co/kuLZ1qkjWx
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All #COVID19 and #SARSCoV2 data is available via #opensource API, built using @biothingsapi Try it: https://t.co/90z1MUKQ3A
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OncoPDSS: an evidence-based clinical decision support system for #oncology pharmacotherapy at the individual level
pubmed.ncbi.nlm.nih.gov
OncoPDSS can serve as both an integrative knowledge base on cancer precision medicine, as well as a clinical decision support system for cancer researchers and clinical oncologists. It receives...
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iGMDR: Integrated #Pharmacogenetic Resource Guide to Cancer Therapy and Research
pubmed.ncbi.nlm.nih.gov
Current pharmacogenetic studies have obtained many genetic models that can predict the therapeutic efficacy of anticancer drugs. Although some of these models are of crucial importance and have been...
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The API was built using our #BioThings #SDK
Looking for #Clinicaltrials , research papers, #datasets, and more on #COVID19? Try our new tool (we also have APIs). #opendata #metadata
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