David Pinto
@carandraugNet
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Computer Vision with @Oxford_VGG (previously Microscopy with @MicronOxford), Software Freedom, @GnuOctave developer, Scouting @Escoteiros_PT
Oxford, United Kingdom
Joined July 2019
Can anyone point me to a biography film where the real life character is still alive but the actor playing that character is deceased?
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I'm today years old when I realised that the `s` in json, pickle, etc loads and dumps methods stands for `string`. I no longer need to check documentation to find out which one handles file handles or strings.
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Come work with us
We are looking for a Research Software Engineer. Application open until 12th October. https://t.co/B5NwrzmcuQ
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An obviously fake paper referenced one of my previous publications with other 258 totally unrelated references. There are a handful of authors that appear in most (all?) of the references. This is International Journal of Inclusive and Sustainable Education vol 1. What to do?
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So much better. For those who don't know how to change this: on the desktop site click the little starts icon at the top of the feed and then select "See latest Tweets instead".
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Ricardo is a good friend of mine and is looking for a post-doc to join his new lab in Oxford.
We are looking for a highly motivated #Postdoc with a background in #Tcells #Immunology #Signaling or #Biochemistry to take on a prestigious 3-year Oxford-BMS Fellowship and find out all about checkpoint inhibition in T cells: https://t.co/6lmz9UDD3Z Please RT!
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Hard to believe that hidden files / dotfiles in Unix came to be, not by design but by a bug in `ls`
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I always "knew" that you couldn't save a JPEG without introducing new compression artefacts. Turns out that was a lie. You can if you edit in DCT space. So I wrote a program to blur regions of a JPEG image keeping the rest of the image intact
github.com
jpegblur - "lossless" "blurring" of regions in JPEG image - carandraug/jpegblur
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I'm now experiment with using git+LFS to commit a single 20GB tar file (not tar.gz), use xdelta to produce binary patches, commit those patches, and then manage those patches with quilt. Maybe I'm missing something obvious?
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Anyone can recommend a strategy to version control and archive many (9 million) small files (average 1.5KB jpg)?
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Setting up @ansible with secrets for multiple people. Guess I can use vault-id for this but changing the encrypted content needs to be done by each person. Would store everyone's GPG keys to re-encrypt things when they change work?
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Anyone out there using BitTorrent to share large datasets (10s to 100s of GB)? We're looking into alternatives because our HTTP server is constantly overloaded. While BitTorrent sounds nice I fear that most universities will block it. What are others doing?
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Our paper on Python-Microscope is now peer reviewed. Maybe read it if you missed it on Biorxiv? We took the @ReviewCommons route and are very happy with the quality of the review (which is also public).
From our 'Tools and Resources' section: Dobbie &co @UniofOxford @MicronOxford present Python-Microscope – a new open-source Python library for the control of microscopes. #openaccess owing to @Co_Biologists's #ReadandPublish agreement with @Jisc: https://t.co/sBFXaPtsIX
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I have found an issue with @emacs. The key-bindings are not suited for when you're cradling a baby and need to type one-handed.
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"columns" is a program to display CSV files in the terminal. I can't believe I'm only learning about it now. https://t.co/vCaAtrWYos
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A small number of people know the real background story to @QuPath, but most don't. I didn't plan to ever tell it publicly, until a Google Alert today caught my eye. A thread about open science & academia 👇 (1/n)
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I have pushed a new release of SIMcheck with @LSchermelleh and @MicronOxford . Incidentally, I have discovered that #imagej updater handles update sites on the local filesystem just fine
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We have a @biorxivpreprint describing, in excruciating detail, the design choices of the #Python #Microscope package. Where does one sign up for preprint peer review #ScienceTwitter ?
biorxiv.org
Bespoke microscopes often require control of multiple hardware devices and precise hardware coordination. It is also desirable to have a control solution that is scalable to more complex systems and...
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New release of the Python Microscope package. Almost one year of development, mostly done without access to hardware. How many new bugs does the new release brings or: how many bugs did the simulated devices and static code analysers prevent? https://t.co/KHHwbygPIG
pypi.org
An interface for control of microscope devices.
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