Marcel Bermudez
@bermudez_lab
Followers
376
Following
3K
Media
3
Statuses
130
Münster | Scientist | Computer-Aided Drug Design | GPCRs | In-Silico Pharmacology
Joined September 2020
Happy to share our recent #review on #allosteric #coupling and #ligand #bias in #GPCR. #allostery
@cyclic_Andreas @MDC_Berlin @FU_Berlin
1
3
15
Here, we present MDPath, a novel tool to study allosteric communication pathways within protein structures: Unraveling Allosteric Communication Paths of Drug Targets through Molecular Dynamics Simulations.
pubs.acs.org
Understanding allosteric communication in proteins remains a critical challenge for structure-based, rational drug design. We present MDPath, a Python toolkit for analyzing allosteric communication...
0
0
3
It is a great pleasure to share that our extensive review on "The Chemistry and Biology of the Tetrodotoxin Natural Product Family" has been accepted for publication at Angewandte Chemie: https://t.co/Au6xajx05a.
1
7
39
📣 We are hiring a PhD candidate in computer-aided drug design with passion for MD simulations and ion channels to join our enthusiastic team at the University of Münster. For more details and information how to apply, please visit:
0
7
13
A bio. tools collection of online resources for GPCR research https://t.co/gjREPN7SfZ Thank you @bermudez_lab for leading this, happy to contribute
bpspubs.onlinelibrary.wiley.com
G protein-coupled receptors are highly complex signal transduction proteins with many potential biomedical applications. Researchers from different fields work together to improve mechanistic...
0
1
6
That's a great resource!
OpenMMDL simplifies MD simulations for protein-ligand systems with OpenMM - 🔬 Facilitates setup, simulation & analysis for #DrugDiscovery & #CompBio. 🌍 Open-source & accessible! 🛠️ Code: https://t.co/dk2YB4A8Xh 📖 Paper: https://t.co/ud9cl0sCIj
#OpenScience
0
0
2
Interested in doing a #PhD in the field of #cellbiology and #pharmcology? We have an open PhD student position and develop novel optical to investigate how heterotrimeric #Gproteins enable #GPCR-specific signaling. Please repost :) https://t.co/AfpZBet2hO
0
19
29
Excited to share our work on GPCR antagonism: Contrary to popular belief, inverse agonists can bind to and act via GPCR:G protein complexes. We show this at kappa-opioid receptors by cellular, radioligand binding and cryoEM studies. A 🧵: @USC @USCDornsife
https://t.co/7EN1pVc3Fd
12
49
232
Very honored to receive the Best Poster Award for the ONCORNET session for presenting dynamic models of ACKR3 to understand how it can bind opioid peptides. Special thanks go to the @GPCRForum team for organizing this fantastic virtual meeting! @PharmaCampus_MS @bermudez_lab
Day one of the #1st_GPCRForum_virtual_meeting ended with the best poster winners for ONCORNET & Adhesion GPCR sessions! 🎉 Huge congratulations to Federike Wunsch & @FlorianBl1! 🎖️ The outstanding awardees will showcase their work at the next GPCR Forum meeting in 2025! 🚀
1
2
13
BitterDB: 2024 update on bitter ligands and taste receptors https://t.co/dHtQuWIq3Z - Please visit to find what is #bitter, to humans and other species
0
7
18
📢 Last Chance! Today is the final day to submit your abstracts for the 1st GPCRForum Conference! Get ready for an exciting program featuring cutting-edge science, inspiring talks, and top GPCR experts! Don’t miss out—check the program and submit today! https://t.co/UIGkADI4lU
gpcrforum.org
369 REGISTRANTS 3 DAYS 34 SPEAKERS 6 SESSIONS 47 POSTER PRESENTATIONS
0
5
5
📢 JOB ALERT 📢 My team @molecularML is searching for a #postdoc with a background in medicinal chemistry! 👩🔬👨🔬🧪 Do you have the experience? Are you eager to contribute to #AI for discovering new drugs? 👉Then DM me! Funded by @ERC_Research and located at @TUeindhoven 🚀
1
46
95
We are excited to share the update that our project OpenMMDL has been accepted as MDAKit, now available at MDAnalysis https://t.co/0QwMFjpIoW and via conda forge https://t.co/XdBSFBq1SR
@openmm_toolkit
@VTalagayev
@YuChen_istry
@Habacef
@jchodera
@orbeckst
github.com
Interface to OpenMM for easy setup of molecular dynamic simulations of protein-ligand complexes - wolberlab/OpenMMDL
0
8
23
We recently launched our seminar series for the #ChemTrap consortium (Topical Program @uni_muenster) with an amazing talk by @yifan_ucsf @UCSF on the structural studies of TRPV1 channel #cryoEM #resolution_revolution. Stay tuned for more updates!
0
8
16
Please check out the final version of our paper, featuring new cyclic peptides that beautifully mimic the actions of the opioid receptor nanobody. This has been a very fun project and we look forward to continuing our work with these new ligands. Congrats to all authors.
Very happy to see that our collaborative paper together with the group of Miriam Stoeber @MiriamStoeber, and Steven Ballet is now online. Many thanks to all authors and contributors to this story. https://t.co/hYxWBnVvV9
2
10
57
Muscarinic receptors never get boring! Here, we report the first photoswitchable allosteric modulators for a class A GPCR. @chem_pharm_ms @IBECBarcelona @Uni_WUE
onlinelibrary.wiley.com
Photoswitchable allosteric modulators for the Class A of a G protein-coupled receptor, themuscarinic acetylcholine receptor subtype 1 (M1R) were developed based on the allosteric modulator benzyl...
#OnTheCover Photo-BQCA: Positive Allosteric Modulators Enabling Optical Control of the M1 Receptor (Michael Decker and co-workers) https://t.co/JEFgF1aJ3f
@IBECBarcelona #openaccess @uni_wue
https://t.co/YFUPyFnL72
1
3
25
#OnTheCover Photo-BQCA: Positive Allosteric Modulators Enabling Optical Control of the M1 Receptor (Michael Decker and co-workers) https://t.co/JEFgF1aJ3f
@IBECBarcelona #openaccess @uni_wue
https://t.co/YFUPyFnL72
0
4
10
Fantastic opportunity!
Are you interested in #GPCR / #Gprotein signaling and #biosensor development? Then please apply for this open #PostDoc position in my new Emmy Noether Research Group @Uni_MR! https://t.co/1PiSKrUcz7
#newPI
0
0
2
Tomorrow is THE DAY! 🎉 We're kicking off the #4th_Transatlantic_ECI_GPCR_Symposium. This is the final reminder for registration! Besides the amazing keynote speakers, and career and lunch/dinner panelists, we have wonderful #ECI speakers who will present their latest research!
0
5
12
A µ-opioid receptor modulator that works cooperatively with naloxone | Nature https://t.co/QaZCobFl6a
0
16
84
If you have a background in chemistry, biophysics, cell biology and ambitious for research we are searching for you!! Apply to do your PhD with us! https://t.co/d1683BQFY7
jobs-sf.ukmuenster.de
PhD Student (gn*) Chemistry, (Bio)-Chemistry, Biology, Molecular Biology, (Bio)-Medicine
15
153
245