Shivani Gunnan
@SGunnan
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If a potato can become vodka, I can become a scientist • Biophysical principles of vertebrate growth lab @mpicbg
Dresden, Germany
Joined July 2021
Our physicist 🇸🇮Urša @brugueslab in the middle of the experimental part of the #biophysics session. @mpicbg @tudresden_de @imprs_mpicbg @digsbb @CRTDpress @PLID_info @brugueslab
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Shivani 🇮🇳@rita_d_mateus is presenting her cool zebrafish model organism @mpicbg @tudresden_de @imprs_mpicbg @digsbb @CRTDpress @PLID_info @SGunnan
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Can we combine inhibitors of the #circadian clock and lineage correlations to detect presence of cell cycle gating by the clock? Excited about our new manuscript from @NCBS_Bangalore, @NCBStheory showing how this might be possible! A short thread (1/6)
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Very happy that our new work from @NCBStheory @NCBS_Bangalore on histone diffusion, challenging the conventional idea of 100% accurate histone-mark inheritance during replication, is now out in @PLOSCompBiol !
How accurate is #histone #inheritance? @Architex_97 & @shaon_chak propose a new model which suggests that the accuracy might be lesser than currently believed. The pre-print of the study is now available on @biorxivpreprint: https://t.co/qIxqdwrton
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Stoked to share a new @teamstembryo preprint @mpicbg @PoLDresden📢. What drives phenotypic variation in embryo models? We discovered an important role for metabolism! https://t.co/mLDOFly250 Highly relevant: https://t.co/M1DvEvKtRn
@LabTrivedi @EbisuyaMiki Let 's eXplain (1/17)
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Happy that our first paper from @NCBS_Bangalore @NCBStheory on detecting weak and noisy #circadian oscillations (without using p-values), is now published! We also show how increased cell density can rapidly generate clock gene expression rhythms in mESCs.
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AbstractMotivation. Detecting oscillations in time series remains a challenging problem even after decades of research. In chronobiology, rhythms (for inst
Excited about our manuscript + R package “ODeGP” for detection of #circadian oscillations in noisy, non-stationary time-series using Gaussian Processes! Led by undergrad @shabnam_sahay, this was a fun theory-experiment project with @SahandHormoz lab https://t.co/jonD5aWbg4 (1/9)
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I am very proud to have contributed to this amazing preprint on notochord (🫶🏼) enhancers by generating an inducible reporter cell line. Congratulations to @d_schifferl (at the @MPI_MolGen) and all the authors for this incredible work🥂🎉 You can check it out here:
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Few hours left until the poster session where I will be presenting my recent work from @teamstembryo to understand ECM dynamics using mouse and human gastruloids! Stop by poster#5 for entering the realm of #stembryos 😉
Sad to miss out on #ISDB2022 but @teamstembryo is representing! Check out poster #5 by postdoc @ConkarDeniz who uses #gastruloids #stembryos to study extracellular matrix dynamics during the sculpting of mouse and human somites. Today 1.30-3pm. Small teaser 👇
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Award Ceremony of the Körber Prize for Anthony Hyman - full news article: https://t.co/R7NSHAJb5J Photos: Körber-Stiftung/Claudia Höhne
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Very excited to propose a new idea in the context of epigenetic inheritance - "Diffusion Accessible Domains" or DADs, in the first manuscript from our new lab at @NCBS_Bangalore and @NCBStheory. A big shoutout to @Architex_97 for all the hard work! Thread to follow soon.
How accurate is #histone #inheritance? @Architex_97 & @shaon_chak propose a new model which suggests that the accuracy might be lesser than currently believed. The pre-print of the study is now available on @biorxivpreprint: https://t.co/qIxqdwrton
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Yesterday, our lab celebrated summer and great achievements from our own Naomi, Nikita and Palina! Of course together with our friends from the @jvveenvliet lab and @CampasLab :)
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We did it, we got through unharmed
Amazing replication study by @noelalben21 of the seminal study by Kahneman and Beaty, 1967! #smpc2022 #musicscience
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"Model"ling of human development has me in awe! Field is expanding with new models but how should we interpret them and what they offer? Was very challenging (as a fresh postdoc out of oven) but rewarding ride with @BernaSozen_ and @jvveenvliet Hope you enjoy!
New Review alert 📢! Collaborative effort by the @teamstembryo @mpicbg & @BernaSozen_ @YaleGenetics labs. About human models of embryo development (#stembryos) - the opportunities, pitfalls & (bright) future. Towards #Carnegie in 4D? https://t.co/rO2E5gYQs5 (1/7)
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#OpenAccess slides of my 90 min workshop lecture about "Advanced #BioImageAnalysis, image data science & AI" at the Zebrafish PI meeting #DDzebrafish22 @CRTDpress Also big thanks to @zoccolermarcelo for an excellent @napari_imaging hands-on session🤩 https://t.co/wxKKa3waVg
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A small glimpse of life in our lab on the occasion of National Science Day! Thanks @katyal_sonal and the NCBS communications team for organizing this; @AnjoomN and @TaniyaMandal4 for the lucid explanations!
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Did you miss our 'Live from Lab' sessions today? Not to worry! You can find them on our FB page! Take a peek at various equipments and experiments that take place at @shaon_chak ( https://t.co/5GxKS12xCt)and
@VatsalaT's labs ( https://t.co/xDZ8bit3PL)!
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Jose‘s paper just came out! Congratulations to Sina, Sandeep and him .. great team work!! @HymanLab Frank Jülicher @mpicbg @PoLDresden
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Our review on phase transitions in tissues, by @Equipe_lenne @IBDMmarseille & @LabTrivedi @embl @the_prbb, is now out in @NatureComms! We discuss the similarities & limitations of analogy of phase transition between biological and inert systems. https://t.co/TpR0nEIUpg
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