Rory Munro
@Rorymatics
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PhD candidate at university of Nottingham, Budget Genomics man #Bioinformatics #Datasci #Python #Rust 🦀🧬🦀
Joined May 2018
i am still high off of solving day 5 part 2 with 0.5s runtime
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For the ninth(!) year in a row, I will be releasing 25 programming puzzles over the first 25 days of December over on https://t.co/yUcqHAUbop! It's completely free thanks to AoC++ supporters and thanks to sponsors. If you want to check it out early, all past puzzles are still up!
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How did I just find out that Nature publishes weekly sci-fi stories?! is this news to anyone else or am I just way behind
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We've put out a new version of readfish, our tool for @nanopore adaptive sampling. This is our v1.0 release and has a lot of improvements, tweaks and stability issues addressed. It has been in testing for a long time and works with all ONT platforms - https://t.co/HNY5XTSA96
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For anybody in Sheffield, there is a 30 metre model of E.coli in the Winter Gardens. This is part of the Biofest that starts next week. #Sheffield
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Minimap2-rs v0.1.16 and -sys bindings released! This includes much-improved support for cross-compilation to Mac aarch64 targets thanks to @rorymatics
#rust #rustlang #bioinformatics #genomics #pacbio #nanopore
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To safeguard the critically endangered kakapo – a unique New Zealand parrot – the genomes of nearly all remaining individuals have been sequenced, providing vital information for conservation management.
newscientist.com
Genomic information for almost all of the 250 kakapos in New Zealand will help determine how best to move birds around to increase genetic diversity
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referring to Rust as “carGolang” just to be confusing
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Minimap2 Rust bindings updated to 0.1.15. Aarch64 compilation, better static builds, and reduced dependencies. See the full announcement here: https://t.co/pqINEF7AZ2
#rust #rustlang #bioinformatics #genomics #pacbio #nanopore
sci.kiwi
Announcing minimap2-rs 0.1.15 release - Biggest features are compilation on aarch64, and better support for static builds. Also reduced dependency version to remove unnecessary tokio dependencies....
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The August issue is live https://t.co/qzVJ2v7K2Z On the cover, an artist’s impression of a protein translocating through a nanopore. Yu et al. identify conditions allowing proteins to translocate through a nanopore when driven by an electroosmotic effect https://t.co/i2FWncjxdY
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Anyone who rts the bread boi will be blessed with that bread this week💰
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Day 16 of great biology papers. "Expression of a Gene Cluster kaiABC as a Circadian Feedback Process in Cyanobacteria." Ishiura M. et al. (1998). Three genes — kaiA, kaiB, and kaiC — encode a clock that oscillates almost perfectly in a 24-hour period. My favorite biology story
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Great seminar within @LongtrecEU presented by @mattloose and @Rorymatics from the @UniofNottingham If you are interested in the topic, contact them for more information or with @l_ferrandez for the recording
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New preprint from @Rorymatics and @alexomics from the lab - Icarust... so - what is this? And what isn't it? A short thread... #nanoporeconf
Icarust, a real-time simulator for Oxford Nanopore adaptive sampling. https://t.co/wl5Jq1rT4j
#biorxiv_genomic
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Feeling personally attacked by @chrisnrg for liking Linux #NanoporeConf
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