alex
@alexomics
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welcome to my website. i'm the one on the left.
At least 2m away from you
Joined April 2017
We've put out a short preprint today showing some updates in Readfish for @nanopore adaptive sampling. https://t.co/GQJJkIql33
@alexomics is giving a talk shortly at the #nanoporeconf about this - but a short thread here.
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Barcode aware adaptive sampling for Oxford Nanopore sequencers. https://t.co/MCah2VFTbE
#bioRxiv
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DNA SEQUENCING: Complex targeted sequencing in real time https://t.co/IasiElRA4M
#ResearchHighlight
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If you haven't already, check out this super cool paper from @alexomics and team, describing their new adaptive sampling toolkit Readfish — for enriching targeted panels in human genomic and metagenomic samples: https://t.co/BcSV4V9l1I
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So - our ReadFish paper came out on Monday https://t.co/LWx6m1HHXZ using GPU - but what if you only have a laptop? Here's an update from @alexomics to our tools that enable ReadFish on Mac, Linux or Windows with no additional GPU or compute. https://t.co/CgicPm4nUH for details.
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Very happy to share our work on selective sequencing use the @nanopore MinION. Code is here: https://t.co/iEcFCnR1rb and the paper is here:
github.com
CLI tool for flexible and fast adaptive sampling on ONT sequencers - LooseLab/readfish
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BioRxiv preprint on selective sequencing with @nanopore sequencers. https://t.co/K9BX61Ocj7.
#phdchat #AcademicChatter
biorxiv.org
Nanopore sequencers enable selective sequencing of single molecules in real time by individually reversing the voltage across specific nanopores. Thus DNA molecules can be rejected and replaced with...
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