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Reza Profile
Reza

@Reza_Ghamsari

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Life-long learner| Looking for patterns in #AML within #BML lab @UNSW|based in @WEHI_research | #multiOmics #bioinformatics πŸ’»πŸ§¬πŸ§‘πŸ»β€πŸ”¬πŸ§‘πŸ»β€πŸ³πŸƒπŸ»β€β™‚οΈπŸš΄πŸΌβ€β™‚οΈ πŸ›’

Melbourne, Victoria
Joined February 2017
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@Reza_Ghamsari
Reza
2 years
It's truly my pleasure to have contributed to this comprehensive review article! My heartfelt congratulations to @roxana_z9 , @HamidRokny, @mo_lotfollahi and the entire team for their great work!
@HamidRokny
Hamid Rokny
2 years
πŸŽ‰Our latest collaborative effort is an in-depth technical review on #DL methods in #SpatialTranscriptomics, published in Briefings_in_Bioinformatics. Tnx @roxana_z9 @mo_lotfollahi @nigelhlovell @Reza_Ghamsari @amin_beheshti et al. Link: https://t.co/ROUYYFPqYn @UNSW #BioMedEng
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@satijalab
Rahul Satija
2 years
As my lab develops Seurat, I wanted to share some thoughts on the important Seurat and scanpy package selection preprint from @Josephmrich/@lpachter 🧡
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@MelbEpigenetics
MelbourneEpigeneticsClub
2 years
Thanks to all who attended our inaugural Melbourne Epigenetics Club event! Especially our fantastic speakers @gilan_omer and Anne Voss! If you missed out or want more, follow us here or sign up on our website for updates. We hope to bring you our next event in a few months!
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@Reza_Ghamsari
Reza
2 years
2/2. Big thanks to my supervisors and advisors @mritchieau @HamidRokny @nigelhlovell @Rachel_Thijssen for their support and granting me the freedom to explore my ideas, and also thanks to @UNSW @WEHI_research @ABACBS @combine_au. #abacbs2023 And I loved Brisbane, beautiful city.
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@Reza_Ghamsari
Reza
2 years
1/2. My first #abacbs23 experience could not be better, I won the Best Poster award at #COMBINE23! Had a pleasure of meeting with brilliant minds in the field, making amazing friends and gaining lots of new ideas. Just got some other great news (to be announce officially later).
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@mritchieau
Matt Ritchie
2 years
We have a Bioinformatics Research Assistant / Research Officer opening in my team @WEHI_research https://t.co/I4gcfzIhSC. If interested, feel free to say hiπŸ‘‹ at #abacbs2023 during a break or at my poster (EL-15) on long-read RNA-seq today (full story at https://t.co/MtvyswZkHD)
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@Reza_Ghamsari
Reza
2 years
I can chat endlessly about #singleCell! Presenting our #AML #multiome research and gaining insights from such brilliant minds is a joy that keeps me inspired and motivated. A big thanks to all the organisers of #ozSingleCell23. @WEHI_research @UNSW
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@shalinhnaik
Shalin Naik
2 years
Gala dinner pre drinks, reading room @library_vic #ozsinglecell23
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@Rachel_Thijssen
Rachel_Thijssen
2 years
Honored to present our venetoclax resistance work at the #iwCLL2023
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@Reza_Ghamsari
Reza
2 years
5️⃣ Proving #snRNA-seq's effectiveness boosts confidence in our #Leukaemia #Multiome dataset. Exciting prospects ahead! #scATACseq #snRNAseq🩸🧬 (5/5). #VCCCA23
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@Reza_Ghamsari
Reza
2 years
3️⃣scRNA-seq induces expression of stress-response genes. 4️⃣Nuclei isolation procedure introduces significant source of variation and background RNA in #snRNAseqβ€”critical optimisation and careful QC in data analysis needed (4/5).
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@Reza_Ghamsari
Reza
2 years
Key findings: 1️⃣ scRNAseq libraries are more complex. 2️⃣ Despite cell-type biases, both methods detect enough genes, ensuring representation and annotation of different cell-types (3/5).
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@Reza_Ghamsari
Reza
2 years
Deeply grateful to my outstanding supervisors, @mritchieau & @HamidRokny, our dedicated collaborator @Rachel_Thijssen, generous fellow researchers @carolyndg & @jafarjabbari and the invaluable support from @UNSW & @WEHI_research #BioMedEng (2/5).
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@Reza_Ghamsari
Reza
2 years
Honoured to present our work comparing @10xGenomics' #snRNAseq & #scRNAseq at @VCCCAlliance conference #VCCCA2023. The panel was amazing, and I greatly enjoyed listening to and learning from such a distinguished group of scientists. I'm truly thankful for this opportunity (1/5).
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@mritchieau
Matt Ritchie
2 years
Delighted to receive a Bioconductor awardπŸŽ‰ So grateful to everyone in the community for their contributions, big & small, that help make Bioconductor such a special project esp. Community Advisory Board members past & present, #BioCAsia organisers, collaborators & lab matesπŸ™
@Bioconductor
Bioconductor
2 years
πŸ† Congratulations to our four Bioconductor 2023 Award winners!! πŸŽ‰ Matt Ritchie @mritchieau, Susan Holmes, Constantin Ahlmann-Eltze @const_ae, Simone Bell Thank you for your outstanding contributions to the Bioconductor community! #Bioinformatics #RStats
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@Reza_Ghamsari
Reza
2 years
Awesome talk by A/P @voineagulab from our uni @UNSW at #ICG2023! Interrogating enhancers using #crisprQTL in #astrocytes. Wondering if #10x #multiome could replace #scRNAseq in #CROPseq, enabling simultaneous capture of the KRAB efficiency (#snATACseq) and its effect (#snRNAseq)?
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@Reza_Ghamsari
Reza
2 years
Absolutely enjoyed Prof. Dawson's talk @TheDawsonLab at #ICG2023! It was ispiring and brought back memories of my past work within @TGEG_ResDx @ONJCRI. Utilising #LiquidBiopsy for detecting and monitoring #cancer markers in #ctDNA of patients' blood. #cfDNA #ddPCR #multiomics.
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@Reza_Ghamsari
Reza
2 years
Excited to share my research on #multiome,#scATACseq,#snRNASeq of #leukemia, at #ICG2023. 🧬Come find me at Poster 220. Looking forward to connecting and exchanging ideas! @UNSW @WEHI_research #BioMedEng #scRNAseq #multiomics #atac #10X #Data_integration #singlecell #cancer
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@Reza_Ghamsari
Reza
2 years
After countless virtual meetings, I finally had the opportunity to meet my labmate @CMacPhillamy in person at #icg2023. Just saw this video that caught the moment by accident.πŸ˜‚
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