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Cell Systems

@CellSystemsCP

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A monthly, peer-reviewed journal from Cell Press devoted to Systems Biology. Posts from the Editors. We are on Bluesky @cp-cellsystems.bsky.social

Cambridge, MA
Joined October 2014
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@CellSystemsCP
Cell Systems
22 days
Together with our partners @ZJU_China, Liangzhu Laboratory, we're thrilled to announce @CellSymposia Taking programmed cell death from mechanisms to interventions 📍Hangzhou, China 📆October 22–24, 2026 Visit our website: https://t.co/XZNqRzh59V #CSCellDeath26
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@CellSystemsCP
Cell Systems
3 months
Hear @EimearEKenny share her work “From categories to context: Rethinking ancestry for precision medicine” @CellSymposia #CSPrecisionGen25, Sept 17–19, 2025 San Diego, CA. 🔗Register here: https://t.co/NrS8jysr50
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@VistaSharesX
VistaShares
3 months
The picks and shovels of the AI economy. AIS provides exposure to companies at the forefront of artificial intelligence—spanning semiconductors, data centers, and AI-enabled applications. Consider how AIS may align with your investment strategy.
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@CellSystemsCP
Cell Systems
4 months
Excited to hear @uarizona’s @DavidEnard share insights on “The genetic legacy of ancient viral epidemics in human host genomes” @CellSymposia #CSPrecisionGen25. Don’t miss it—register today! 🔗 https://t.co/8XM3lKLd0m
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@CellSystemsCP
Cell Systems
7 months
Biotechnology plays a crucial role in areas such as healthcare, agriculture, environmental sustainability, and industrial processes. Journals across Cell Press have come together to share exciting papers in this growing field. Visit the collection: https://t.co/t5CyZGs9QD
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@CellSystemsCP
Cell Systems
8 months
We were so excited to see the innovative science at @KeystoneSymp's Machine Learning Applied to Macromolecular Structure and Function! Access the content now on-demand: https://t.co/cfYlVXIrWm #KSMLStructure25
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@fabian_theis
Fabian Theis
10 months
1/ „What is the main bottleneck in deriving biological understanding from spatial transcriptomic profiling?" @CellSystemsCP asked a few of us for comments on this, I think quite cool read here at
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@CellSystemsCP
Cell Systems
10 months
Shen et al. introduce SpaTrack to reconstruct cell differentiation trajectories from spatial transcriptomics data at single cell resolution within a spatial context by using optimal transport #BGI-Research @BGI_Genomics
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cell.com
Shen et al. introduce SpaTrack, which integrates cell transcriptomics and spatial position using optimal transport to reconstruct cell differentiation trajectories. SpaTrack is applied to disentangle...
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@CellSystemsCP
Cell Systems
10 months
Our February issue is online. On the cover: Regenerative trajectories of axolotl telencephalon regeneration inferred by SpaTrack using spatial transcriptomic data. https://t.co/3sbMgnaLoP
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@SamirSuweis
Samir Suweis
10 months
🚨 Early Career Researchers 🚨 Don’t miss out on the Alma Dal Co School on Collective Behaviour (Sep 29 - Oct 4, 2025, Venice, Italy)! 🧬🌍 An interdisciplinary event with talks from 18 world-class experts #qbio! 🤝💡 ⏳ Deadline: Feb 28, 2025 Apply now:
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almadalcoschool.github.io
The Alma Dal Co School on Collective Behaviour
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@AHRI_News
Africa Health Research Institute
10 months
"Scientists need to re-imagine their role in society, incorporating new models of public service & mutual learning with communities to ensure science remains relevant, impactful & transformative for society." - @Thumbi_Ndungu for @ImmunityCP 'service' ➡️ https://t.co/WTkKRQXpgy
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@ProShares
ProShares
1 month
Get to know TQQQ: The world’s largest leveraged ETF, targeting 3x daily Nasdaq-100 returns.*
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@CellSystemsCP
Cell Systems
11 months
Metzner et al. present Multiome Perturb-seq, extending single-cell CRISPR screens to simultaneously quantify perturbation effects on the epigenome and transcriptome in a scalable way, describing the integrated effects on cell state @thenormanlab
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cell.com
Multiome Perturb-seq extends single-cell CRISPR screens to simultaneously quantify perturbations’ effects on the epigenome and transcriptome. A CRISPRi screen of chromatin remodelers using this...
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@CellSystemsCP
Cell Systems
11 months
Nagano et al. present SCEPTR , a TCR language model with a pre-training strategy combining autocontrastive learning and masked-language modeling, to predict TCR specificity, outperforming existing language models and sequence-based methods @andimscience
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cell.com
How should we train protein language models to predict protein function? This study shows that pre-training using an autocontrastive loss greatly improves transfer learning compared with masked-lan...
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@CellSystemsCP
Cell Systems
11 months
Using active learning with MPRAs in the developing mouse retina, @rfriedman22 et al. train a CNN to distinguish between activating and repressing regulatory DNA elements composed of the same TF binding sites @genologos @CorboLab @WashUGenetics
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cell.com
Friedman et al. introduce an active machine learning workflow to iteratively train deep learning models of regulatory DNA on successive rounds of experimental data. Using active learning with...
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@CellSystemsCP
Cell Systems
11 months
Preview by Edmund C. Lattime and Subhajyoti De:
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@CoinDesk
CoinDesk
19 hours
From the builders coding the next protocol to the institutions allocating capital, everyone who matters in Web3 gathers at Consensus. Join thousands of attendees in Miami for 3 days of collaboration, learning, and partnership building. It’s the one event you can't afford to miss.
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@CellSystemsCP
Cell Systems
11 months
Hirsch et al. use a stochastic model of gene expression evolution to study adaptation in melanoma subclones and uncover gene expression patterns associated with canonical and non-canonical Wnt signaling resulting in the proliferative & invasive phenotypes
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cell.com
This study uses a stochastic model of gene expression evolution to study evolutionary adaptation in melanoma subclones with distinct phenotypes. It uncovers distinct adaptive gene expression patterns...
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@CellSystemsCP
Cell Systems
11 months
Lin et al. use machine learning and metabolic modeling to infer cellular objectives from multi-omics data, revealing trade-offs between stress protection and growth in embryonic development @sriram_lab
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cell.com
How do cells balance competing metabolic needs? This study introduces SCOOTI, a tool to infer objectives and trade-offs in cellular metabolism using machine learning and modeling. SCOOTI revealed...
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@CellSystemsCP
Cell Systems
11 months
Hoffman et al. demonstrate that a common ERK kinase translocation reporter (KTR) is also activated by CDK2, develop computational correction methods to subtract CDK2 signal, and present a new ERK KTR that does not show crosstalk with CDK2. @Spencer__Lab
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@CellSystemsCP
Cell Systems
11 months
Our first issue of 2025 is online! On the cover: Heatmap of temporal activity of ERK, measured using the modified ERK kinase translocation reporter and read out as cytoplasmic:nuclear ratio in single cells before and after treatment with 10 nM Trametinib. https://t.co/CUmFA93oyp
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@CellSystemsCP
Cell Systems
11 months
Join our editor Dr. Ernesto Andrianantoandro at @KeystoneSymp's, Machine Learning Applied to Macromolecular Structure and Function. Scholarship, abstract submissions, and early registration are still open! Register today: https://t.co/sFyp7yufvh #KSMLStructure25
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@chainlink
Chainlink
8 days
Chainlink: Linking Crypto to Capital Markets.
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