Stephen Gonzalez
@sci_stephen
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Developmental biology, single-cell omics, cars, and music. PhD candidate, @uwgenome @coletrapnell
Seattle, WA
Joined August 2023
🌿 Today, we remember Salk Professor Joanne Chory, a visionary plant biologist and a force for climate action. Her research revolutionized how we understand plant biology and inspired solutions to fight climate change. Joanne’s brilliant mind and passion will forever impact the
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Our first-ever PHYTOMap experiment was a SUCCESS! What a perfect way to wrap up the week—phew!
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Today out in @biorxivpreprint we present SCOPE. An optics-free, self-registering array of DNA encoded beads for spatial genomics. This was work led by the intrepid duo of Hanna Liao and Sanjay Kottapalli, with @JShendure's lab.
biorxiv.org
Spatial genomic technologies include imaging- and sequencing-based methods ( [1][1]–[3][2] ). An emerging subcategory of sequencing-based methods relies on a surface coated with coordinate-associated...
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1/5 📢 Exciting news! My new book "Arbi the Model Plant" is now available in English, with Hebrew, Arabic, German, and Spanish versions to follow! 🌱📚
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Wow, @nature has retracted the 2020 Poore et al. cancer microbiome paper that we showed ( https://t.co/hBvfGCvyGR) was deeply flawed. The retraction date is tomorrow so I can't yet read the official notice, but I'll update when I can @RetractionWatch @ProfBootyPhD
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This encouraged us to develop a new plate assay that can simulate drought at the transcriptome level in roots, and we demonstrate its effectiveness by assessing growth in a panel of Arabidopsis accessions (3/3).
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In this manuscript, we compare different osmotic stress assays using RNA-seq. Surprisingly, across treatments we found wide variability in gene expression profiles in the Arabidopsis root, an unexpected result since profiles were largely consistent across shoots (2/3).
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Excited to announce that research I performed with @_joseph_swift and @JoeEcker at the @salkinstitute has been published in @eLife (1/3). https://t.co/Y7EonhFrzi
elifesciences.org
The 'low water' agar assay provides a reliable and practical high-throughput method for studying plant molecular signaling responses to drought stress.
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Careers in Genomics Symposium 2024 May 21st, 1-5:30pm Pacific In Person: South Foege Hall Auditorium Rm S064 @uwgenome and online! Register to attend! https://t.co/y1zOXXzpdF
#Symposium #Genomics #EarlyCareer #Research #STEM 1/5
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