UCSF Bakar Computational Health Sciences Institute
@UCSF_BCHSI
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Bakar Computational Health Sciences Institute at the University of California, San Francisco
San Francisco, CA
Joined June 2018
.@UCSF BCHSI's founding director @atulbutte inducted into the @americanacad! @UofCAHealth @UofCalifornia Well-deserved honor to all inductees!
Congratulations to UCSF's Dr. @AtulButte on his induction into @americanacad — one of the country's oldest & most prestigious honor societies! Dr. Butte shares the honor with new inductees, including @mrdannyglover, Gloria Steinem & @andersoncooper.
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Unsupervised Large Language Models to Identify Topics in Cancer Center Patient Portal Messages. Co-authored by @julian_hong Read the full article https://t.co/HulW5v68Jb
#MachineLearning
ascopubs.org
PURPOSEThe increasing use of patient portal messages has enhanced patient-provider communication. However, the high volume of these messages has also contributed to physician burnout.METHODSPatient...
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Excited to have this study led by @jihyunRadOnc out! We identified frequent message topics to physicians at @UCSFCancer. We recently rolled out #AI routng (jury still out), so glad to publish this foundational work! @UCSFRadOnc @UCSF_BCHSI @UCJointCPH @UCSF_DOCIT
Unsupervised Large Language Models to Identify Topics in Cancer Center Patient Portal Messages. Co-authored by @julian_hong Read the full article https://t.co/HulW5v68Jb
#MachineLearning
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Computational Cancer Community (C3) bootcamp applications due 10/10! Intro. trainees to ideas in computational cancer including bioinformatics, computational biology, statistics (teach the R language) C
cancer.ucsf.edu
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Join us today for the Virtual CPH Info Session with Dr. Adam Yala and Dr. Serina Chang today October 8, 3–4 PM PT as part of the 2025 Admissions Diversity Fair! Register here to attend: https://t.co/kncUz6OhSy
#AI4Health #AI #ML #healthcare #PhD #CPH
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Congrats to CPH's Adam Yala (@yalatweets) , collaborator @MaggieChungMD and team, honored with UCSF Carroll Innovation award for bold, disruptive research on vision/language models for improved diagnosis. Pioneering work and a great honor! @UCSFimaging
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Remote monitoring of disease activity has the potential to improve research & clinical care in dermatology, but validated tools are lacking. @UCSF Center for Real World Evidence team worked on the de-id study data, the body/dermatology photos https://t.co/OtFGBHRUeI
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This was a massive team effort - huge shout-out to the brilliant first author, Alex Lee, and our fantastic collaborators at the @AllenInstitute, including Bosiljka Tasic, @HongkuiZeng, and the entire team. @UCSF @UCSF_BCHSI @UCJointCPH @UCSF_BTS
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Excited to share our lab's latest paper in Nature Communications, where we introduce CellTransformer, an AI model that creates a fine-grained map of the brain with unprecedented scale and detail: https://t.co/3e1HDprSgK
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Remembering @AtulButte A Big Data Visionary With a Big Heart via @JAMANetwork @msirota84 @CALonghurst @UCSF
jamanetwork.com
This Medical News article is in remembrance of Atul Butte, MD, PhD, a pioneer in using data science to improve health.
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Hoping to improve cancer care delivery and side effect management for all #radonc patients! Original paper here: https://t.co/UEZ7Z32l7L
ascopubs.org
PURPOSEPatients undergoing outpatient radiotherapy (RT) or chemoradiation (CRT) frequently require acute care (emergency department evaluation or hospitalization). Machine learning (ML) may guide...
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She demonstrated that the model continues to work well at other institutions, with next steps in adding more hospitals to our work and collaborating with @Jean_J_Feng to strengthen external performance.
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Great work by @UCJointCPH PhD student Marianna Elia who was featured in today’s #ASTRO25 abstract highlights! Mari bought our previously tested algorithm to reduce ED visits and hospitalizations from @DukeRadOnc to @UCSFRadOnc and @BIDMC_CancerCtr
https://t.co/HpymR80TGK
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Hi #MedTwitter! I'm Aryan, a postdoctoral researcher @UCSF_BCHSI, & a US-IMG from @TehUofMed, applying for #InternalMedicine in #Match2026. Looking forward to connecting with mentors, programs, and peers! AAMCID: 16739722
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BCHSI faculty @ppinheirochagas et al publish their first AI-Human paper! Generated using AI Scientific Writer "Redefining Language & Neurodegeneration Through PPAClinical Phenotypes, Network Vulnerability & Global Research Directions" https://t.co/sxUl4LNv7B
@UCSFMedicine
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Come by Digital Health Science Highlights for a preview of @UCJointCPH student Marianna Elia’s work on multi-institutional generalizability of our algorithm predicting unplanned acute care! Mari’s talk early tomorrow mornng! #ASTRO25 @UCSFCancer @UCSFRadOnc @UCSF_BCHSI
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Come by the session! Med student Matt Kim from our lab is also discussing the prediction of future comorbidities in prostate cancer survivors! #astro25 @UCSFRadOnc @UCSFCancer @UCSF_BCHSI
Support ROI-Funded research being presented at #ASTRO25! Check out PQA 02 - Lung Cancer/Thoracic Malignancies, Patient Reported Outcomes/QoL/Survivorship, Pediatric Cancer at 4:45pm in Hall F to hear these presentations funded through ASTRO's Foundation. @julian_hong @hughrt7
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Cancer outcomes SPORE grant co-led by @FranklinHuang & Susan Chang - UCSF Awarded $12M Research Grant to Improve Cancer Outcomes @theNCI
newswise.com
UCSF will receive the Specialized Programs of Research Excellence (SPORE) grant to improve cancer health outcomes across three translational research projects focusing on three types of cancer with...
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Tomorrow afternoon, Dr. Peder Larson (@pezlarson) will host several @UCSF_Ci2 members for a 20-30 minute discussion on #AI tools & methods. See you then!
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🚀 Call for submissions! Join us for the "𝐍𝐞𝐮𝐫𝐨 𝐟𝐨𝐫 𝐀𝐈 & 𝐀𝐈 𝐟𝐨𝐫 𝐍𝐞𝐮𝐫𝐨" Workshop at 𝐀𝐀𝐀𝐈 2026 𝐢𝐧 𝐒𝐢𝐧𝐠𝐚𝐩𝐨𝐫𝐞 (𝐉𝐚𝐧 26–27, 2026)! 📝 Submit your work by Oct 30, 2025: https://t.co/tTiYpiDM7k 🌐 Details: https://t.co/8YfRTsQNvA
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Join us & @UCSF_Epibiostat Fri., Sept. 19 for "Beyond the Monitor: My Journey into AI and Critical Care" w/ @pirracchior 1-2pm PST. Register https://t.co/Ub7SgXYIsm
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