Teng Fei
@StatFei
Followers
262
Following
545
Media
9
Statuses
119
Biostatistician @MSKBiostats; PhD @EmoryRollins @laneygradschool; BSc @CityUHongKong. 🏎 🎸(Opinions are my own)
Joined March 2011
Excited to share our R package for microbiome data analysis, published @CellRepMethods, which makes log-ratio lasso regression more accessible for R users, supporting continuous, binary and survival (competing risks) outcomes. https://t.co/YeXHzPdoBZ
https://t.co/ipBvWQl8FK
2
10
26
Another good example of utilizing the powerful {gtsummary}, {ggsurvfit} and {tidycmprsk} packages for clinical data analysis @MSKBiostats. Congratulations to @KRejeski, Jaime, @RShouval, and team!
One of the more frequent questions we’ve received since the development of the ICAHT grading system is: What about thrombocytopenia after CAR T-cell therapy? We’ve tackled this question head-on in our new paper out now in @BloodJournal 👇 https://t.co/gs2cv2yXQT
0
3
4
🚨 Check out our new grading system for thrombocytopenia (#T_ICAHT) after #CART
https://t.co/S8VARx9J1a
@BloodJournal Led by Drs. @KRejeski, Jaime Sanz, @StatFei & team — incredible multicenter collaborative effort. See Kai’s 🧵for more insights!
ashpublications.org
Key PointsBased on duration and timing of thrombocytopenia, we introduce T-ICAHT as a novel grading that expands on the existing N-ICAHT system.Severe (gra
One of the more frequent questions we’ve received since the development of the ICAHT grading system is: What about thrombocytopenia after CAR T-cell therapy? We’ve tackled this question head-on in our new paper out now in @BloodJournal 👇 https://t.co/gs2cv2yXQT
0
5
20
An exciting real data application of finite mixture model/latent class analysis with prediction modeling. Congratulations to the team!
🚨 Just out @NatureMedicine! Introducing InflaMix—a point-of-care tool that identifies an #inflammatory 🔥 signature predictive of #CART failure in #lymphoma Led by Sandeep Raj (@SSRaj017) 👏@MSKCancerCenter
https://t.co/k0tQMZBSxS 🧵Let’s break it down
0
0
3
🚨 Just out @NatureMedicine! Introducing InflaMix—a point-of-care tool that identifies an #inflammatory 🔥 signature predictive of #CART failure in #lymphoma Led by Sandeep Raj (@SSRaj017) 👏@MSKCancerCenter
https://t.co/k0tQMZBSxS 🧵Let’s break it down
nature.com
Nature Medicine - A preinfusion circulatory inflammation biomarker-based signature predicts the likelihood of treatment failure in patients with non-Hodgkin lymphoma who were treated with CAR-T...
4
41
154
Seeking a Microbiome Research Program Manager in NYC Ideal candidates: bio MS/PhD seeking a more admin/programmatic role, or a project-coordinator type with a sufficient science background to be able to help assemble science grants/presentations. https://t.co/TnkwygnyoX
0
2
6
🚨Big news!🚨 We're expanding our reach! 📢 Our department is now on Bluesky in addition to X! 🎉 Follow us for the latest updates, research highlights, and insights on both platforms. 🔗 Bluesky: https://t.co/y7jFrnkxya
#ScienceCommunication #MSK #NowOnBluesky
0
2
2
My lab at @GeiselMed has an open postdoc position in fungal metabolomics. We will combine isotope tracing, mass spectrometry data analysis, and mathematical modeling to understand metabolic rewiring in fungal cells. Research question depends on your interest. Please RT and apply!
3
59
121
🚨Now hiring at #MSKBiostats: Faculty Position in Biostatistics. Join our team of 45 biostatisticians (19 faculty and 26 research staff) to pursue independent research and provide statistical collaboration with medical or basic science investigators. https://t.co/YtEpsMcibH
0
6
6
Interested in developing biostatistical / machine learning tools with applications in translational cancer microbiome research? I am hiring a postdoctoral scholar @MSKBiostats! Please feel free to DM if you have questions. https://t.co/I87cDyJvWp
linkedin.com
We are hiring a postdoctoral fellow in biostatistics at MSKCC. Please feel free to share this post with potential candidates. We encourage the candidates to send application materials as instructed...
0
2
2
Special thanks to @tylerfunnell @nickwotters @SSRaj017 and Mirae Baichoo for brainstorming and improving the method. Many thanks to the data management and clinical team @vandenBrinkLab @MSK_DeptOfMed. Lastly, thank you @DrMvandenBrink @gonen_mithat for the strong supports!
1
1
6
To incorporate longitudinal compositional data in survival models, one needs to curate a subject-level matrix `data_unique` with survival variables and a sample-level matrix `data` with subject ID and sample collection time variables. Check https://t.co/G7VLlT6L6g for details.
1
0
1
FLORAL works similarly as glmnet, but imposes the zero-sum constraint for the compositional features. For non-compositional features, use `cbind` to place them at the beginning of the feature matrix and use `ncov` to avoid imposing the constraint for non-compositional features.
1
0
0
Motivated by the clinical data of allo-HCT patients @vandenBrinkLab, we incorporate longitudinal (time-dependent) microbial features in survival models, allowing much more samples and achieving more robust feature selection performances than using peri-engraftment features only.
1
0
0
📢🔥🚨 Interested in a paid summer internship doing cancer research? If so, applications for QSURE Summer 2025 are now open! 📩💻Submit your application by 1/18/25! 📌 More information and our application link are found here! https://t.co/KgvRchAtFO
0
3
3
📢📸 Live from #JSM2024! Always great to see current and former #MSKBiostats colleagues at these meetings. @StatFei @gonen_mithat @begumbektas @VeSeshan @And_Der @XiyuPeng
0
2
18
📢 #MSKBiostats is hiring an Assistant Research Biostatistician! ℹ️ Seeking applicants interested in collaborative projects in #CancerResearch with a Master's in #biostatistics or #statistics 📩 To apply: email cover letter, CV, and names of 3 references to reinera@mskcc.org
0
9
7
Our paper on the meaning of oral bacteria in feces is out in @NatureMicrobiol ! We suggest their increased relative abundance in the gut is due to depleted gut-resident bacteria, not their active growth. Huge thanks to @T19R84, Ana, @tmhohl71, Joao, and all collaborators!
I am happy to share our joint work with @cliao345 and Ana Djukovic from @MSKCancerCenter on what detection of oral bacteria in fecal samples actually means! 1/n https://t.co/COrG3iafmo
8
12
50
Excited to see this paper out ! 🎉 Together with the wonderful @emilyliangmd we developed a fully automated approach to grade hematotoxicity (ICAHT) after CAR-T Check out the link below ⤵️ https://t.co/MgOJQpNtGE
3
13
45
Excited to see this morning our co-first author paper published by Nature Microbiology: Altered microbial bile acid metabolism exacerbates T cell-driven inflammation during graft-versus-host disease #gvhd #transplant @DrMvandenBrink @DrSarahLindner
nature.com
Nature Microbiology - Graft-versus-host disease, a T cell-driven inflammatory condition, is associated with altered microbial bile acid metabolism in both mice and humans and this is linked to...
4
7
30