For those of you hunting for your next position, please consider applying for a postdoctoral position in our lab. Our science is wild and exciting, and I promise to train and feed (yes, w/free food) you well. It doesn't hurt that we are on a publication hot streak.

Interested in developing biostatistical / machine learning tools with applications in translational cancer microbiome research? I am hiring a postdoctoral scholar @MSKBiostats! Please feel free to DM if you have questions. https://t.co/I87cDyJvWp

Excited to share our R package for microbiome data analysis, published @CellRepMethods, which makes log-ratio lasso regression more accessible for R users, supporting continuous, binary and survival (competing risks) outcomes. https://t.co/YeXHzPdoBZ https://t.co/ipBvWQl8FK

Interested in DNA replication and genomic instability? Our new method PERT identifies S-phase cells and estimates replication timing from single cell whole genome sequencing (scWGS) data with heterogeneous copy number https://t.co/o2d8ZXlnbR 1/10

My new lab at @MSKCancerCenter is recruiting a postdoc and also a computational biologist to work on #microbiome and cancer #immunotherapy. https://t.co/UOnErs4jZQ. Postdoc position linked below. compbio position soon. Please reach out. https://t.co/mqaj2GZtAS

My wife, Vicky, made an award-winning & touching short film "Elephant". It's about a jovial old man trying to process his Alzheimer's diagnosis while agonizing over how to protect his love from heartbreak. https://t.co/nDpJPNpfCv A love story in time for Valentine's Day 🙂

Exciting opportunity for a Data Engineer to join the van den Brink lab at MSKCC and help us understand how gut bacteria affect cancer patients! https://t.co/iSoiVm1rpz

Hey everyone, for something a little different on Black Friday, I'd like to show you a no budget micro-short my wife (I helped a bit) made before the pandemic. She shot it in <4 hours with a couple of talented SAG actors! https://t.co/Y6y4BMG6Ui #indiefilm #shortfilm #Filmmaking

Interested in structural variant mutational processes at single genome resolution? latest preprint, product years of hard work, reveals clock-like serrate structural variants. kudos to @tylerfunnell @oflanach , everyone in @sajraparicio & @SohrabShah labs.

Excited to share some new work with @sajraparicio, @SohrabShah, and teams where we looked at genomic instability at allele-specific resolution in more than 30,000 single-cell whole genomes 1/11

Evolutionary tracking of cancer haplotypes at single-cell resolution https://t.co/iiYP823v49 #bioRxiv

The impact of mutational processes on structural genomic plasticity in cancer cells https://t.co/TG9iBqHu13 #bioRxiv

CellAssign from @SohrabShah and @kieranrcampbell uses a probabilistic model to leverage prior knowledge of cell-type marker genes to annotate scRNA-seq data. https://t.co/IkkHxEPyYG Read our News & Views on supervised clustering for #SingleCellAnalysis. https://t.co/p6eYjQIg0e

Twitter friends: My lab is searching for an eccentric, excited computational postdoc/scientist to lead multimodal (metabolic, immunophenotypic, genetic) analysis in RCC and AML. Job ad coming soon, pls spread the word and come join the vibrant community @CompOncMSK @KidneyCancer

Our method CellAssign for automatically assigning cell types from scRNA-seq data is published today Paper: https://t.co/BpJRSHcGSM R package: https://t.co/8HrJm99ODx (1/8)

Reviewer 2 agreed that the ability to determine structures directly within the cellular environment would "transform structural cell biology" https://t.co/uLrnDXaCUZ #fromthedecisionletter #ResearchAdvance

New from Funnell et al. Integrated structural variation and point mutation signatures in cancer genomes using correlated topic models https://t.co/UooInmF8d2 Part of our cross journal #MachineLearning in Health and Biomedicine collection https://t.co/KF78oZYiFH

A new statistical framework for mutation signature discovery out today: https://t.co/kcZmPng3Y7 . Fantastic work by @tylerfunnell - integrates multiple mutation types into signature discovery with correlated topic models: relevant to cancers with DNA repair defects.

A new approach for detecting somatic mutations from multi-region tumor sequencing out in @CommsBio . Lots of hard work by Fatemeh Dorri- congratulations! https://t.co/cqjYVtPcnH #muclone

How to classify cell types in single cell RNA-seq data without needing to cluster data up front? Use CellAssign - new method from @kieranrcampbell and Allen Zhang in the lab out today: https://t.co/o3vycBOlpI , encodes prior information for probabilistic cell-type assignment.