Ruoyan Li
@RuoyanLi
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Assistant Professor @MDAndersonNews. Former postdoc @teichlab @sangerinstitute | Cancer genomics, Single-cell genomics, Somatic evolution
Houston, TX
Joined April 2019
RT @shang_lulu: Excited to share our latest work: Celina, a statistical method to identify cell type-specific spatially variable genes in s….
nature.com
Nature Communications - The authors develop Celina to detect cell type-specific spatially variable genes (ct-SVGs) in spatial transcriptomics. These ct-SVGs exhibit distinct spatial expression...
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RT @KoplevS: By combining single-cell atlases across the human gastrointestinal tract we discovered a population of inflammatory epithelial….
nature.com
Nature - The study provides a comprehensive transcriptomic atlas of the human gastrointestinal tract across the lifespan, highlighting inflammation-induced changes in epithelial stem cells that...
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RT @nicholas_navin: New paper from our group in @Nature by @YiyunLin_YL @junkewang @KaileWang and team reporting the unexpected discovery o….
nature.com
Nature - Using single-cell DNA sequencing we show that most healthy women harbour rare populations of aneuploid epithelial cells with copy number alteration events in their breast tissue that...
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Thrilled to share our recent work on cutaneous T cell lymphoma. Check it out. @NatImmunol @teichlab @HaniffaLab
nature.com
Nature Immunology - Haniffa and colleagues provide diagnostic aids, potential biomarkers for disease staging and therapeutic strategies for cutaneous T cell lymphoma.
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My lab is hiring a postdoc! We use state-of-the-art genomics, single-cell and spatial approaches to explore cancer initiation and evolution. Come join us at @MDAndersonNews! Please share and RT.
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RT @nicholas_navin: We are recruiting assistant/associate level faculty in the new Systems Biology department at MD Anderson Cancer Center….
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RT @teichlab: We are pleased to announce that our paper on CellHint was published today in @CellCellPress. Here, we describe this new tool….
cell.com
A machine learning architecture to harmonize and integrate cell types across single-cell datasets reveals cell-type relationships in health and disease.
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RT @PengHeCam: 🚀My first postdoc project at @teichlab is now published online! Huge thanks to @ZHANGLAB, Bao Zhang, John Lawrence, @Shuai….
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RT @EarlyCancerCam: A fantastic opportunity to receive academic mentorship and guidance from @Tom_J_Mitchell, group leader at the Early Can….
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RT @nicholas_navin: Our new Department of Systems Biology at @MDAndersonNews has open faculty positions! Our department is the perfect pla….
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RT @nicholas_navin: excited to announce our new paper in @CellCellPress on ARC-well by @KaileWang @TapsiKS, on a new single cell DNA-seq na….
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Check out this great opportunity to join the fantastic Mitchell Lab!.
Job alert - PDRA in Cambridge. Come and explore cancer genomics in a vibrant collaborative team . Please RT!. @EarlyCancerCam @CRUKCamUrol @CambCancer @CRUKCamCentre @MaxineGBTran @grantissimus
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RT @KelvinTuong: Bringing V(D)J analysis to the single-cell space is difficult. We continued to developed dandelion to help with this, find….
biorxiv.org
Assessment of single-cell gene expression (scRNA-seq) and antigen receptor sequencing (scVDJ-seq) has been invaluable in studying lymphocyte biology, but current tools are limited. Here, we introduce...
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RT @Tom_J_Mitchell: Patients with rare tumours such as SDH deficient RCCs can suffer from uncertainties around diagnosis and decisions rega….
cell.com
Cancer systems biology; Cancer; Genomics
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RT @laidlawsean: I’m super proud to show off my first lead paper, officially a real scientist now!!Thanks so much to @R_Rahbari and @drmatt….
onlinelibrary.wiley.com
Background Analyses of small non-coding RNA (ncRNA) expression in malignant germ cell tumours (GCTs) have focused on microRNAs (miRNAs). As GCTs all arise from primordial germ cells, and piwi-inter...
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RT @TailorBio: Tailor Bio’s co-founders @markowetzlab @gjmacintyre have published their research on pan-cancer chromosomal instability (CIN….
nature.com
Nature - Copy number signatures characterize different types of chromosomal instability and predict drug response.
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RT @markowetzlab: Great to see so much excitement about CIN today. #17DeadlyCINs. Congrats to @NischalanP and @cd_steele on their paper….
nature.com
Nature - A new framework enables a pan-cancer reference set of copy number signatures derived from allele-specific profiles from different experimental assays.
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