Centre for Bioinformatics, University of Oslo
@unioslo_bioinfo
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The hub of Bioinformatics & Computational Biology @ the University of Oslo
Joined March 2020
RT @AMathelier: Looking for a postdoc in my group .@NCMMnews @NordicEMBL @UniOslo_MED @unioslo_mn @unioslo_bioinfo to enhance computational….
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RT @IvarGrytten: KAGE2 is out! Enables very fast and accurate genotyping of structural variants using pangenomes: ….
biorxiv.org
Structural variation is known to play an important and often overlooked role in regulating disease and traits, but accurately detecting structural variants from sequencing data has traditionally been...
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RT @victorgreiff: Very excited that our work on the plasticity of antibody developability is out! Led by @HabibBas….
biorxiv.org
Designing effective monoclonal antibody (mAb) therapeutics face a significant challenge known as “developability”, which reflects an antibody’s ability to progress through development stages based on...
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RT @elixirnorway: 🎉 Happy 70th Birthday to Eivind Hovig! 🎂🥳 Your outstanding contributions to #bioinformatics have paved the way for groun….
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RT @mkuijjer: I am happy to announce that our most recent study is now published in NAR Cancer: 🥳 authored by @tanj….
academic.oup.com
Abstract. Characterizing inter-tumor heterogeneity is crucial for selecting suitable cancer therapy, as the presence of diverse molecular subgroups of pati
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RT @AMathelier: 📢Oslo tweeps, we are looking forward to seeing you for the NCMM seminar @NCMMnews on June 6th at 12noon for @BorisLenhard's….
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RT @trinebrounge: Did you know that you can measure host #microRNA in the gut? and in #colorectal cancer #FIT screening samples, used by mi….
medrxiv.org
Faecal microRNAs represent promising molecules with potential clinical interest as non-invasive diagnostic and prognostic biomarkers for their stability and detectability. Colorectal cancer (CRC)...
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RT @AMathelier: We're excited to share our manuscript describing COBIND, a novel tool for the identification of transcription factor co-bin….
biorxiv.org
Transcription factor (TF) binding to DNA is critical to transcription regulation. Although the binding properties of numerous individual TFs are well-documented, a more detailed comprehension of how...
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RT @AMathelier: Excited to host Julien Gagneur @gagneurlab for Sven Furberg webinar on May 4, 2pm. He will talk abt "Detecting and predicti….
mn.uio.no
Dr. Julien Gagneur, Professor in Computational Molecular Medicine at the Technical University of Munich, Germany, will present his research on
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RT @SandveGeir: Very reassuring to see that almost all #RECOMB2023 talks include assessment on simulated data, even hearing "of course - si….
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RT @IvarGrytten: Excited to share this work by our master student Jørgen Henriksen! The initial idea was to see whether our previously publ….
biorxiv.org
As decreasing DNA sequencing costs leads to a steadily increasing rate of generated data, the development of efficient algorithms for processing of the sequence data is increasingly important to...
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RT @victorgreiff: Our perspective on adapting LMs for protein sequences with the help of linguistic knowledge is now out in @NatMachIntell.….
nature.com
Nature Machine Intelligence - Language models trained on proteins can help to predict functions from sequences but provide little insight into the underlying mechanisms. Vu and colleagues explain...
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RT @trinebrounge: Our updated deep #viral sequencing protocol, now including more #HPV types and #SARSCoV2, is published. Detailed protocol….
virologyj.biomedcentral.com
Background Previously developed TaME-seq method for deep sequencing of HPV, allowed simultaneous identification of the human papillomavirus (HPV) DNA consensus sequence, low-frequency variable sites,...
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RT @BioNumPy: BioNumPy has been updated with changes that make it a lot easier to work with genomic intervals and data on a reference genom….
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RT @trinebrounge: Read about HPV mutations and cancer, and our research in this article (in Norwegian):
titan.uio.no
Les denne saken på Titans nettsider.
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RT @EOSC4Cancer: Last week, WP3 leads @MachaNikolski @CNRS & Eivind Hovig @UniOslo held a #hackathon on a biomarker-oriented clinical trial….
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RT @mkuijjer: Would you like to develop your own research line, on the interface of network science, computational tool development, and ca….
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RT @unioslo_titan: Livmorhalskreft kan utryddes med vaksiner og gode screeningprogrammer, mener forskere. @unioslo_bioinfo @OsloCancer .htt….
titan.uio.no
Les denne saken på Titans nettsider.
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A 4-year PhD fellowship in Informatics/Bioinformatics is available at @unioslo_bioinfo as part of @UiO_LifeSci. The projects will focus on synthetic data generation, applied machine learning and benchmarking within molecular life sciences: Please RT.
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RT @AMathelier: I am thrilled to share that I got a tenure position @UniOslo!.On March 1st, I will start as the Associate Director of @NCMM….
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